Gallus gallus (chicken): 423844
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Entry
423844 CDS
T01006
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
gga
Gallus gallus (chicken)
Pathway
gga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
423844 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
423844 (EXOSC1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
423844 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
423844 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
423844
NCBI-ProteinID:
XP_015144282
CGNC:
14307
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All DBs
Position
6:23305819..23307582
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AA seq
209 aa
AA seq
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MGGGLLAASRATRNMAPPARYCVPGERLCSTEEASAGSGTYARHGSIFASLAGCLQRCAE
GGGLPVVSVVRDAEAQLLPGVGAVVTCKVCSINSRFAKVNILYVGSTPLKSTFRGTIRRE
DIRATEKDKVEVYKSFRPGDIVLAKVISLGDAQSNYLLSTAENELGVVVARSEAGVQMVP
ISWCEMQCPQTHTKDFRKVARVQPQFLQT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagggctccttgcagcctcgcgcgcgacgcggaacatggcgccgccggctcgg
tactgcgtgcccggcgagcggctgtgcagcacggaagaggcctcggcgggcagcgggacc
tacgcgcggcacggctccatcttcgcatcgctggccggctgcctgcagcgctgtgccgag
ggcggcgggctgcccgtggtgtcggtggtgcgggacgcggaggcgcagctgctgcccggc
gtgggggccgtggtgacctgcaaggtgtgcagcatcaactcccgttttgccaaagtgaac
atcctgtacgttggctccacgccgctgaaatccaccttccgcggcaccatacggagggaa
gacattcgagccaccgagaaggataaggtagaagtctacaagagtttccgccctggtgac
atagtcctggccaaagtcatatcgctgggggatgcgcagtccaactacctgctgagcacg
gcagagaacgagctgggcgtggtggtggcacgcagtgaggcaggggtgcagatggtgccc
atcagctggtgtgagatgcagtgcccacagacacacaccaaggacttccgtaaggtggcc
cgcgtgcagccgcagttcctgcagacctag
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