Gallus gallus (chicken): 423872
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Entry
423872 CDS
T01006
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gga
Gallus gallus (chicken)
Pathway
gga03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
423872 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
423872 (TAF5)
03036 Chromosome and associated proteins [BR:
gga03036
]
423872 (TAF5)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
423872 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
423872 (TAF5)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
423872 (TAF5)
STAGA complex
423872 (TAF5)
TFTC complex
423872 (TAF5)
SAGA complex
423872 (TAF5)
SLIK complex
423872 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_RIG_2nd
Beta-prop_SCAP
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ASA1
Beta-prop_NOL10_N
WD_LRWD1
Beta-prop_SPT8
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
DNAI3_WD
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
423872
NCBI-ProteinID:
NP_001026406
CGNC:
52068
Ensembl:
ENSGALG00000008241
UniProt:
Q5F3I7
LinkDB
All DBs
Position
6:24383454..24394488
Genome browser
AA seq
785 aa
AA seq
DB search
MAAVPEEPAEVVAVKPDPEAGTPPQPPAAPPATAAPPAPSAAAAEGETAGSAGDASSAKP
SAPGPAASPAALDRQTLVAVLQFLRRSNLRESEEILRREARLLGEDLGAAALSPAGAGLP
GASGGEGDASSSEALLSRVTAAAAIAIGSSVAPVASSSPGVAAATAVPPGKVGGGVVEDQ
PDVSAVLSAYNQQGDPTLYEEYYSGLKNFIECSLDCHRAELSQLFYPLFVHMYLELVYNQ
HESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQ
LLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFG
LLKEPEFDVPLDDEDEEGENEEGKPKKKKAKRDSVGSKSKKQDPNAPPQNRIPLPELKDS
DKLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVR
VWSVTPKKLRSVKAAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDR
NYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATD
HYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSL
AFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTV
RLWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAG
AYSSQ
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtacctgaggagccggcggaggttgtcgcggtgaagccggacccagaggcg
ggaacgccgccgcagccccccgccgctccccccgctaccgccgctccccccgctccctcg
gccgcggcggcggagggggagacggcggggagcgccggggacgcgtcgtccgctaagccc
tcggcaccgggcccggccgcctccccggcggcgttggaccggcagacgctggtggccgtg
ctgcagttcctgcggcgcagcaacctccgagagtccgaggagatcctgcgtcgcgaagcc
cgcctgctcggcgaggacctcggagccgccgccctcagccccgccggtgccgggctcccg
ggagcctcggggggagagggggatgccagcagcagcgaggcgctgctcagccgggtcacc
gccgccgccgccatcgcgataggaagcagcgtcgcccccgtcgcctcttccagcccgggg
gtggcggcagcgaccgcagtgccaccggggaaagttggaggaggtgttgtggaggatcag
ccagatgtgagcgcagtgttgtctgcctacaatcagcagggggacccaacgctgtatgag
gagtactacagtggtttaaaaaacttcattgagtgttccctagactgtcatcgagccgaa
ttgtctcagctgttttatcctctctttgtgcacatgtacttggagttggtctacaatcaa
catgagagtgaagctaagtctttttttgaaagatttcatggggatcaggaatgttactac
caagatgacctccgtgtattatctagcttaaccaaaaaagaacacatgaaaggtaatgag
accatgctggatttccgaacaagcaagtttgttctgcgtatttcccgtgactcttaccaa
ctcttgaagaggcatcttcaggaaaagcagaacaaccagatctggaacattgttcaggag
catctctacattgatatttttgatggaatgcctcgtagtaaacaacagatagatgctatg
gttggaagcttggctggggaggcaaaacgagaggcaaataaagcaaaggttttctttggc
ttactgaaagaaccagagtttgatgtgcctttggatgatgaagatgaagaaggagaaaac
gaggaaggaaaaccaaagaagaaaaaagctaaaagagacagtgtagggtcaaaaagtaaa
aaacaagaccctaatgctcctcctcaaaacagaattcctcttcctgagctgaaagactca
gataaactggataaagtgatgaacatgaaggaagctgccagacgtgtgcgtcttgggcca
gagtgcctgccttccatctgtttctacacgttccttaatgcttatcagggtctaactgca
gtggatattacagatgactccagcatgattgtaggaggctttgctgactctacagtcaga
gtgtggtccgtgactccaaaaaagctacgtagtgtgaaagcagcagcagacctcagtcta
attgacaaagaatcagatgatgtcttggagaggatcatggatgagaaaactgcaagtgag
ttgaagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgatagg
aactacctgttgtcctgttctgaggacggtactgtcagattgtggagcctccaaacattc
acgtgtctggtgggatataaaggacacaactatccagtatgggatacacagttctctcct
tacgggtattactttgtgtcagggggacatgacagagtggcaagactgtgggcaacagat
cattaccagcctttacggatatttgctggccaccttgctgatgtgacgtgtactcgattt
caccctaactccaactacattgccactggctcagcagacaggactgtacggctctgggat
gttttaaatgggaattgtgtaagaatattcactggacataagggtccgattcattcgttg
gcattttctcctaatggacgattcctggctactggagcaacagatggcagagttctgctg
tgggatattggacatggcttgatggttggagaactgaaagggcacactgacactatctat
gcgctccgattcagtagagatggggagattttagcatcaggttcaatggataacacagtt
cggctgtgggatgcagtgaaagcatttgaagatttagaaacggatgactttactacagcc
actggacacataaacttgcctgaaaactcacaggacttgttactaggtacatacatgacc
aaatcaactccagttgtccaccttcattttacacgcaggaacttgctgctagctgcagga
gcctacagttcacagtag
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