Gallus gallus (chicken): 423986
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Entry
423986 CDS
T01006
Symbol
COL5A2
Name
(RefSeq) collagen alpha-2(V) chain isoform X2
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
423986 (COL5A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
423986 (COL5A2)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
423986 (COL5A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
TILa
Amnionless
Motif
Other DBs
NCBI-GeneID:
423986
NCBI-ProteinID:
XP_004942453
CGNC:
1798
Ensembl:
ENSGALG00000031112
LinkDB
All DBs
Position
7:421873..611515
Genome browser
AA seq
1496 aa
AA seq
DB search
MMAIRVEMRTFFILAALLGLFVTIKAQEEEDYDAGEDVEEIACTQNGQMYLNRDIWKPSP
CQICVCDNGAILCDEIQCQDVLECENPQVPPGECCPVCPHTARDFDPTVGRGRKGQKGEP
GIVPPVSGIRGRPGPAGPPGSQGPRGERGPKGRPGPRGPQGIDGEPGIPGQPGDPGPPGH
PTHTGPDGLSRPFAAQMAGLDEKSGLGSQMGLMPGAVGPVGPRGPQGLQGKQGGAGPTGP
PGEPGDPGPMGPVGSRGPEGPPGKPGEDGEPGRPGQSGEPGFPGSPGPRGFPGAPGLPGL
KGHRGLKGLDGPKGEIGAAGAKGESGPTGAMGATGPLGPRGMPGERGRIGPQGAPGGRGQ
HGMPGKPGPMGPLGITGSPGFPGAPGMKGEAGPTGPRGPEGPQGQRGETGPQGPAGSQGL
PGTEGTDGSPGAKGPTGSPGTGGPPGLLGPPGSPGPQGSTGPPGIRGQPGDPGVPGFKGE
AGPKGEPGPQGPQGPIGPIGEEGKRGPRGDPGSVGPPGPVGERGAPGNRGFPGSDGLPGP
KGAQGERGPAGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGGPGEDGR
PGPAGSIGIRGQPGSMGLSGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGP
PGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGVVGPLGPRGERGNPGE
RGEPGASGLAGEKGMAGGHGPDGPKGSPGPSGTPGDPGPPGLQGMPGERGIAGTPGPKGD
RGGMGEKGAEGTAGNDGARGLPGPIGPMGPAGSTGEKGEPGPRGLVGPPGSRGNPGSRGE
NGPTGAVGFAGPPGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPPGPSGVPGLKGG
RGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGP
AGPPGGPGDKGDAGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGK
QGPTGPPGDKGPPGPIGQSGATGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGEPGPAGL
PGSPGGPGTPGPVGPPGDAGQRGETGSRGPVGPPGRAGKRGLPGPQGPRGDKGDNGDRGD
RGQKGHRGFTGLQGLPGPPGPIGEQGSPGIPGPFGPRGPPGPVGPSGKDGSPGPLGPIGP
PGVRGSVGEAGPEGPPGDPGPPGPPGPPGHLTAAIGDIMGHYDDAMADPLPEFTEDEAAP
DDHNKTDPGVHATLKSLSSQIETMRSPDGSKKHPARTCDDLKLCHPSKKSGEYWIDPNQG
CVEDAIKVYCNMETGETCISANPSTIPRKTWWASRSSDLKPIWYGLDMNRGSQFVYGDTA
VTQMTFLRLLSKEASQNITYLCKNSVGYMDDQTKNLKKAVILKGANDLEIKAEGNSRFRY
TVLQDSCSKRNGNVGKTVFEYRTQNVARLPIIDIAPVDVGSTDQEFGIEIGPVCFV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaatcagggtagaaatgagaacttttttcatccttgccgctttattagggcta
ttcgtcaccataaaagcacaagaagaggaagattacgatgctggagaagatgttgaagag
attgcctgcactcagaatggccagatgtacctgaacagggatatttggaagccctcaccg
tgccagatttgtgtctgtgacaacggagctattctttgcgatgaaatccagtgtcaagat
gtgttggagtgtgagaacccacaggtgcccccaggagagtgctgtccagtgtgtccccat
accgcacgtgattttgaccctaccgttggcagaggaagaaaggggcaaaaaggagaacct
ggaatagtgccacctgtttcaggaatacgaggccgcccagggcctgcaggacctcccggt
tcacagggaccacggggagaacgaggacctaagggaagacctggtcctcgtggtcctcaa
gggattgatggagaacccggtatccctggccagcctggtgaccctggtcctcctgggcat
ccaactcacacaggaccagatgggctaagcaggccatttgcagctcagatggcaggtctg
gatgaaaaatcaggacttggtagtcagatggggctgatgcctggtgctgtgggtccagtg
ggtccaagaggtcctcaaggtcttcaaggaaaacaaggtggtgctggccccacaggccct
cctggtgaacctggagatccaggacctatgggtccagttggttcacgtggaccagaaggg
cctccaggcaaacctggtgaagatggtgaacccggtagaccaggacagtctggtgagcct
ggatttccaggatctccagggcctcgaggctttcctggtgctccaggtcttccaggtctc
aagggtcacaggggattgaaaggtctcgatggtccaaaaggtgaaattggagcagctgga
gcaaagggagaatctggaccaacaggtgccatgggtgcaacaggtcccctaggacctaga
ggaatgccaggagaaagaggtcgaattggaccacagggtgcccctggtggacgtggtcag
catggcatgcctggaaagcccgggccaatgggtccccttggcataactggttctccaggt
tttccaggcgctcctggtatgaagggagaagcaggtccaaccggtcctcgtggtcctgaa
ggccctcaaggacaaagaggtgaaactggtccacaaggcccagctggatcacaaggtctt
cctggtacggaagggacagatggctctccaggtgccaaaggcccaactggatctccaggc
actgggggcccccctggcttattgggtccacctggttccccaggaccacaaggcagtaca
ggcccacctggtattcgagggcagccgggagatcctggagttccaggtttcaagggagaa
gcaggacccaaaggtgaaccaggcccgcaaggtccccaaggtcccattggccccataggt
gaagaagggaaaagaggccctcgaggtgatccagggtcagtgggtccaccaggtccagtt
ggagagaggggtgctcctgggaaccgtggttttccaggttctgatggcttgcctggacca
aagggtgcccaaggagagcgtggtccagcaggttcttctggtcctaaaggaggtcaggga
gatcctgggcgtcctggtgagcctggactcccaggtgcaaggggtttgacaggaaatcca
ggtgttcaaggccctgaaggaaaacttggccccttgggtggccctggagaagatggacgt
cctggtcctgcaggttcgataggaatcagaggtcagccaggcagtatgggcctttctggg
ccaaagggtagtagtggtgatcctggtaaaccaggagaagcaggaaatgcaggtgttcca
ggacaaagaggagctcctggcaaagacggtgaagtcggtccttctggtcctgttggccca
ccaggcctggcaggagaaagaggagaacaaggccctccaggtcctacagggtttcagggc
ttacctgggcctccaggtcctcctggtgaaggaggaaagccaggtgatcagggtgttccc
ggagatcctggagttgttggtccattgggtcccaggggagaacgtggcaacccgggggaa
cggggagagccaggtgcatcaggacttgcaggtgaaaagggtatggctggaggtcatggt
cctgatgggccaaagggaagcccaggccctagtgggacgcctggtgatccaggcccacca
ggtcttcaaggtatgcctggagaaagagggattgctggaactcctggtccaaagggtgac
agaggtggtatgggtgagaaaggtgctgaaggtactgctggcaatgatggggcaagaggt
cttcctggtccaataggcccaatgggtccagcagggtccactggagaaaagggtgaacca
ggtcctcgaggtcttgttggtcctcccggttctcgtggaaaccctggttctcgaggagaa
aatggcccaactggtgctgttggttttgctggtcctccaggccctgatggtcagccgggt
gtgaaaggtgaacctggggaacctggacagaaaggagatgctggatctccaggaccacag
ggtcttgctggatctcctggtccaccaggtccttcaggtgttcctggtctgaaaggtggt
cgaggaacccagggtccccctggtgctactggattccctggatctgctggaagagttgga
cctcctggacccactggagctccagggcctgctgggcctattggtgagccaggaaaagaa
ggtcccccaggtcttcgtggtgatcctggttctcatggtcgtgtgggtgatcgaggacca
gctgggccccctggtggtcctggagacaagggtgatgcaggagaagatgggcaaccgggt
ccagatggccccccaggtccagcaggaactactggtcaaagaggtattgttggtatgcca
ggacagcgaggggaaagaggcatgccaggactgccaggtcctgcaggtacaccaggaaaa
caaggtcccacagggccacccggtgataaaggtcccccaggacctattggccaatcaggt
gccactggacctgtaggggaagctggtccagaaggacctgctggtaatgatggtactcca
ggacgagatggagctgttggagagcgtggtgatcgtggtgaacctggccctgcaggccta
cctggttctccaggaggtcctggaactccaggtcctgttggccccccgggagatgcaggt
caaagaggtgaaactggttctcgagggccagtgggtcccccaggccgtgcaggaaaaaga
ggtttgcctggtccccaagggcctcgtggtgacaaaggtgacaatggagatcgaggtgac
aggggccagaaaggacacagaggtttcactgggcttcaaggtcttcctggtcctcctggc
cctattggtgaacagggcagtcctggcattccaggcccatttggtcctcggggtcctcca
ggtccagttgggccttcaggcaaagatggaagtcctggaccactagggccgattgggcct
cctggtgttagaggaagtgtaggagaagctgggcctgagggtccaccaggtgatcctggc
cctcctggtccccccggccctccaggtcacctcactgctgccattggtgacattatggga
cactatgatgatgctatggcagatccactaccagagtttactgaagatgaagcagctcct
gatgaccacaataaaacagacccaggagtccatgccacgctgaagtcactgagcagccag
attgagactatgcgcagcccagatggttcgaagaaacacccagcacggacttgtgatgac
ctgaagctgtgccacccatccaagaagagtggtgaatattggattgatcctaatcaggga
tgtgttgaagatgctataaaagtatactgcaacatggaaactggagagacctgcatttct
gcaaatccatcaactatcccacgtaaaacatggtgggccagcagatcatctgacttgaag
cccatttggtatggccttgatatgaacaggggatcacagtttgtgtatggggatacagct
gtcactcaaatgacattcctgcgcctcctgtcaaaggaagcttcccagaatatcacttac
ctctgtaagaacagtgttgggtacatggatgaccaaactaagaacctcaagaaagctgtc
attctgaaaggggccaatgacctggagatcaaggcggagggaaacagccgattcagatac
actgttcttcaagacagctgttctaaacgtaatggcaacgtgggcaagacggtctttgag
taccgaacgcagaacgtggcacggttgcctatcatagatatcgcaccagtggatgttggc
agcactgaccaggaatttggaattgaaattgggccagtttgttttgtgtaa
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