Gallus gallus (chicken): 424470
Help
Entry
424470 CDS
T01006
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gga03016
]
424470 (TRMT13)
Enzymes [BR:
gga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
424470 (TRMT13)
Transfer RNA biogenesis [BR:
gga03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
424470 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
424470
NCBI-ProteinID:
XP_422313
CGNC:
3937
Ensembl:
ENSGALG00000005290
UniProt:
A0A8V0ZWQ4
LinkDB
All DBs
Position
8:complement(12324376..12336139)
Genome browser
AA seq
481 aa
AA seq
DB search
MAAQDAASGSSGSGPGPLPGRCAFFVQRKRRFCKMVPALGRRFCGEHGQQEKENDRKRIP
CPLDQKHTVYEDQLQKHLKKCNSRAKPKPVYFVQDINAGVKDVAEIPTDQVTLSSLSKEE
LENLIIKLKKASNGLELDLKEQVLSHQALQEALNDPKNGDSAFKHLKQQASILGNMEKLH
LLGPGRCFVEFGAGRGKLSHWVDIALQDVENIQFLLIERATTRFKVDGKHKKRDSIFERL
QVDIQHLCLNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYATCCNEENQEPVPKR
TKNKAEGSSNSSNDDDNERNKEVVKPVAGIVIALCCHHKCDWTHYVGREFFRSVGLGPVE
FHYFQRMSSWATCGMRGTITKASTNEESEDHANNAEELDQTYSKTETSSDALQRLLTVEE
RKEIGSLCKLVIDHGRIRYLQHRGYKAALQYYTDSSVSLENVLLTAVPDTTSKIQLPQIS
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcaggacgcggctagcggcagctcgggctctgggccaggcccgctgccaggg
cggtgcgccttcttcgtgcagaggaagaggcgcttctgcaagatggtcccggcgctcggg
agacgcttttgcggggagcatgggcagcaggagaaagaaaacgacaggaaaagaattcca
tgccctcttgatcagaaacatactgtgtatgaagaccaactacagaaacatttaaaaaaa
tgtaattccagagcgaagccaaagccggtctactttgttcaagatattaatgcaggtgta
aaagatgtagcagaaataccaacagatcaagtaactctctcttccctatccaaagaagag
ctagagaacttaattatcaagttgaagaaagcaagtaatggtctggaacttgaccttaaa
gaacaagtactctctcaccaggctttacaggaagccttaaatgacccaaagaacggggac
tctgctttcaaacacttgaaacagcaggcttctattttaggtaacatggaaaaattacat
ttgcttggtccaggaagatgttttgttgagtttggagctgggcgaggaaagctgtctcat
tgggttgatattgccttacaagatgttgaaaatattcaatttttgcttatagaaagggca
actacaagattcaaggtggatggaaaacataaaaagagagattctatatttgaaaggctt
caagttgatattcagcatttatgtttaaataaggtacctattttagagaagaaaaaatta
ccagtggtaggaattgggaaacatttgtgtggtgctgccacagatcttgctttgagatgt
ttggtagaaagttatgcaacttgctgtaatgaagaaaatcaagagcctgtaccaaaacgt
actaagaataaggcagaagggtcttctaacagttcaaatgatgatgataatgaaaggaac
aaagaagtcgttaagcctgtagctggaattgttattgcgctgtgttgccatcacaaatgt
gactggacacattatgtaggcagagagttctttagatcagtaggacttggaccagtagaa
tttcattattttcaaaggatgagtagctgggccacttgtggcatgagaggaaccataacc
aaagcctctacaaatgaagaaagtgaagatcacgctaacaacgcagaagagcttgaccaa
acatacagtaaaacagagactagttctgacgctctacaaaggctccttactgttgaggag
cgaaaggagataggttccctctgtaaacttgtgattgatcacggacggatcagatattta
caacatcgaggatacaaggctgcactacagtactatacagattcctctgtgtccttggag
aatgtcctgctgacagctgtcccagacacaacaagcaaaatccagcttccacagataagc
agatga
DBGET
integrated database retrieval system
