Gallus gallus (chicken): 424509
Help
Entry
424509 CDS
T01006
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
424509 (HFM1)
Enzymes [BR:
gga01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
424509 (HFM1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Meiosis-specific proteins
Others
424509 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
424509
NCBI-ProteinID:
XP_025008937
CGNC:
4571
LinkDB
All DBs
Position
8:14937102..14969389
Genome browser
AA seq
1398 aa
AA seq
DB search
MFSSADEVFSLENLFYERPDTKKRCCRRLLKNAFTLHFYDRDLENNKSNIWWIAPAPAID
EIPPAEELQRELEKNTASSSMGGIKHQKFIQQCKSITEEVNDKSPAPTHFGIASEKEMLR
LCVGERTKKHGSLKMASTFLSPDKAKYKIGTEIFQQPDSNFSQTKILINFPENGDDESVH
SPFRKSLFKMPDCMYKNTEFKDSSMDMKEVDTHFNTSENVTEVKKDTWRENHQPPVTKDS
DFTLHRLCYIYYYAILSQLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKV
VYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIHHAHIIITTPEKWDSMT
RRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHDVPPLRF
VAVSATIPNAEDIAEWLSDGKMPAVCLKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTL
NYKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLSVEQKQRLQKSANSLKDS
KLRDLLMYGLAYHHAGMEVSDRKIIEGAFTAGDLPVLFTTSTLAMGVNLPAHLVVIKSTM
HYVGGVFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYIQMLNGADIIESSLH
RHLVEHLNAEIALHTVTDVTVALEWIRSTFLYIRALKNPTHYGFSSGLDKIGIEAKLQEL
CLKNLNDLSSFNLIRMDKENNFKPTETGRLMAWYYIAFDTVKQFFRIKGTETLKELVTMI
SNCTEFLDVKLRTNEKKILNALNKDKDKVTIRFPMEGRIKTREMKVNCLIQAHLGCIPVQ
DFTLTQDTGKIFRNGVRVTRWLSDFLASSKDNFSALLNSLILAKCFRCKLWENSLHVSKQ
LEKIGVSLSNAMVNAGLTSFKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELNIE
QLPKYSDTMAEILVTTILTNFEQLQTRRTASDFHYVTLVVGDADNQVIFIQKIMDSVLLK
TGNWMKKIEVKRALKSDDISINLISSDYVGLDIQQTYTAFYLTPRTVGSKVVINKLKAES
SLDTSCGTAQNLPAAKVDSGSRSKEENICKKYSNRECNHRCKNKDVCGHDCCKTGVLSKS
ETSGDSKFSLYLADLRSRNSTSSVPPVKRLKMQMLNQAQNVDLKQFVFEPKSLMPASSRS
GNKESFSSPSVVQVDSFNNLGKSQKQFQSWNYGKSDALDMSAELRDDVWDDLDDEVLVVA
SNLFSRELDEYETLHKYSTSEATSDISEDSCLLQGDTRIQNPVLSVFNSSSKVELSVQSG
HINTFTSQENEHSNLSQELEKIQCSSISKIIPDSSKFTRKENFFIFTKEQEEEMEPRYLP
DDETSDVKPLLGLLDDIF
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctctgcagatgaggttttttcattggaaaacttattttatgaaagaccagat
acaaagaaaaggtgttgcaggaggctcttaaagaatgcttttaccttgcatttttatgat
agagatctagaaaataacaagtcaaacatttggtggattgcacctgctccagcaattgat
gaaattccacctgcagaggagctacagagggaactggaaaaaaacacagccagcagtagc
atgggagggataaagcaccaaaagtttatacaacaatgtaagagtatcactgaggaagta
aatgacaaatcaccagcacctactcattttggcatagcttctgaaaaagaaatgctccga
ttatgtgtaggagaaagaacaaaaaagcatggaagtctgaaaatggcttcaacgtttctc
tctcccgataaagctaaatataaaataggaacagagatttttcagcaacccgattcaaat
ttctcacagactaaaatattaattaattttccagaaaatggtgatgatgagagtgttcat
tcaccgtttcgaaaaagcttatttaaaatgcccgattgtatgtataaaaatacagaattt
aaagatagttcaatggatatgaaagaagttgatactcactttaatacaagtgaaaacgtg
acagaagtgaaaaaagatacatggagagaaaatcatcagcctccagtaactaaagactca
gattttaccctacataggctgtgttatatttactactatgccattctttcccagcttctt
tatacagatagaaattttgtgatttgtgctccaactggctctggaaaaactgtaatgttc
gaactagctattaccagattacttatggaagtcccaatgccttggttaaatattaaagtt
gtttatatggctccaataaaagctctatgcagtcaacgttttgatgattggaaagaaaaa
tttggacccataggactcagctgcaaggaactgacaggagatacagtggtggatgattta
tttgaaatacatcatgctcatattattatcactacacctgaaaaatgggatagcatgact
agaaggtggaaagacaactctatagttcagcttgtgcgactgtttctcatagatgaggtg
catgttataaaggatgaaagccgtggcgcaacattggaagttgtagtcagtcgaatgaag
accgttcagtcttctctttggcgtctttcagagaatcatgatgttcctcctttgagattt
gtagctgtttcagcaacaattccaaacgctgaagatattgcagaatggctttcagatggg
aagatgcctgctgtttgtctgaaagtagatgaggatcaacgaccagtgaagctacgcaaa
attgttcttggttttccttgcagtgacagtcagacagaattcaaatttgacttaactctg
aactacaaaatagctagtgttatacaagcatactctgatcaaaaaccagtactggtgttc
tgtgccacaagaaaaggagtgcagcaagctgcttctgttctttcaaaagatgccaaattt
ctactgagtgtagagcagaaacaaaggttacagaagtctgcaaattcattgaaagattcc
aagcttagagatcttttaatgtatggtctggcgtatcatcatgcgggtatggaggtttct
gacagaaaaataattgaaggagcttttactgcaggagatttacccgtactttttactact
agcaccttagctatgggagtcaatctgcctgcacatctggtggttataaaatccacaatg
cactatgttggaggagtgtttgaagagtacagtgaaactgatattctgcaaatgattggg
agagcaggaaggcctcaatttgacacaacagctacagcagtaattatgactcgcttgagt
acaagggagaagtatatacagatgttaaatggtgcagatataatagagagcagcttgcac
agacatcttgtggagcatttaaatgcagaaatagcgttacatactgtcacagatgtcact
gtagctttggaatggatacgatcaacgttcttgtacattagagctttaaaaaatccaact
cattatggtttttcatctggattggataaaattggaattgaagcgaaattacaagaactc
tgtttgaagaacttgaatgatttatcgtctttcaatttgatcaggatggataaagaaaat
aatttcaagccaacagagactggaagattaatggcatggtattatattgcatttgataca
gtaaagcagtttttcagaattaagggaaccgaaactttaaaggaattggttacaatgatc
tccaactgcacagaatttctagatgtcaagttaagaacaaatgagaagaaaatactgaat
gccttgaataaagacaaggacaaagtaactatcaggtttccaatggaggggaggattaaa
acaagagaaatgaaagtaaactgtcttattcaggctcacctaggatgcattcctgttcaa
gactttactttgacacaagatactggcaaaatatttagaaatggtgtaagagttactaga
tggttatctgactttctggcatcaagtaaagacaacttttctgcattattaaactctctg
attttagctaagtgtttcaggtgcaaactttgggaaaattcacttcacgtgtctaaacaa
ttggaaaaaattggtgtgtcattgtcaaatgctatggtaaatgctgggctgacatcattt
aaaaaaatagaagacacaaatgcaagggagcttgaattgattttaaacagacatcctcct
tttggaaaccagataaaagaatctgttttgcatcttccaaaatatgaacttaacattgaa
cagcttccaaaatacagcgatacaatggctgaaattttagtaaccaccatattaacaaac
tttgagcagctacagacaaggagaacagcgtcagactttcactatgttacgttggttgta
ggagatgctgacaatcaagtcatttttattcagaaaataatggattctgtgctgctgaaa
actggaaattggatgaagaaaattgaggtgaaaagagctcttaaatcagatgacattagt
ataaatttaattagttctgattatgttggccttgatatacagcaaacatatacagccttt
tacttaacaccaagaacagtgggaagtaaagtagttataaataaactgaaagctgagtct
tctcttgatacatcttgtggcacagcacaaaatctgccagcagcaaaagtggattcagga
agcaggtctaaagaagaaaatatctgtaagaaatacagtaacagagaatgtaaccatcgc
tgtaaaaataaagatgtgtgtggacatgactgctgtaaaactggagtactttcaaagtct
gagacgagtggagattcaaagtttagtttgtacctggctgatttaaggagcaggaactct
acttcatctgtgcccccagtaaagcggttaaagatgcagatgttaaatcaggctcaaaat
gtggatctcaaacaatttgtttttgaacccaaatctttgatgccagcatcatcaaggtct
ggcaataaagagtcattttcatcaccttcagtggtccaggtagatagttttaataactta
ggaaaatctcagaaacaattccagtcctggaactatggaaagagtgatgctttggatatg
agtgctgaactgagagatgacgtttgggatgatcttgatgatgaagtattagtagttgct
agcaaccttttcagtagagaattagatgagtatgaaacccttcacaagtattcaacaagt
gaagccacaagtgacatttcagaagattcttgcctattacaaggtgataccaggattcag
aacccagttctctctgtgtttaatagctcatcaaaagtggaattatctgtacagagtgga
catataaatacattcacttctcaagaaaacgagcattcaaatctttcacaagagctggaa
aaaatacaatgttcttcaatttcaaaaataatcccagactcttctaaattcactaggaaa
gagaatttttttattttcacgaaggaacaggaagaagaaatggaacctagatatcttcct
gatgatgagaccagtgatgtcaagcctttgcttggactacttgatgacatattttaa
DBGET
integrated database retrieval system
