KEGG   Gallus gallus (chicken): 424725
Entry
424725            CDS       T01006                                 
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
  KO
K08740  DNA mismatch repair protein MSH4
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    424725 (MSH4)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    424725 (MSH4)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV AAA_14 AAA_22 nSTAND3 SpoIVA_ATPase ATPase_2 AAA_23 AAA_18 AAA_30
Other DBs
NCBI-GeneID: 424725
NCBI-ProteinID: XP_004936961
CGNC: 8660
Ensembl: ENSGALG00000011392
LinkDB
Position
8:30145368..30177155
AA seq 929 aa
MSNGSSKTEACGQAVISAASESYTGRCSSSLSGLGGHYTLGLLQTPRSTADSTGGFSSGG
AGLTPFRAAGSGGKEPPRSGRGESYLGDKSSCAENASAVNLTGGGSARSLNNACVGKVPF
STNRSIGRSHTPVTGYSVTSSSTASAHTAASVIVAVVEGRGLARGEVGMASIDLKNPEVI
LSQFADNTTYAKVITKLKILTPLEIIMPNTSCEAGNTTKLFALITEHFKNVTFTTVQRKY
FNETKGLEYIEQLCASEFSTVFMEIQSKYYCLAAAAALLKYVEFIQNSIYAPKSLKVHFQ
GSEKTAMIDSSSAQNLELVTNNRDSRNGHTLFGVLNYTRTPGGSRRLRSNILEPLVDAET
IKTRLDCVQEFLQDEELFFGLQAVISKFLDTEQLLSILVQIPKQDTVKTAESKISNIIYL
KHTLELVEPLKAALRRCNTSLLRAYYNALEDRRFGIILEKITAVINDDTRYAKGCLSMRT
QKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPLKTSFSSVRGFFIQMNAD
CSALPNGKLPSEFTKVTKTRNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIY
EHIHCLYKLSDIVSMLDMLLSFAHACTISDYVRPEFTDTLAIKQGWHPILEKIAMEKPVS
NNAYLTEGSNFLIITGPNMSGKSTYIKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIG
MDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNL
KAFTLFATHFLELCHMDALYPNVENYHFEVQHVRSSAGKEKITYTYTLSKGYTEEKNYGL
KAAEVSSLPPSIILDAKAITNHIAKQILHRQRTTPEMMKHRAVYHLAMRLVQTARNSRLD
SDSLQIYLKGLKKKYTASCPASERSDEQH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atgtcgaacggcagtagtaagacggaagcgtgcgggcaggcggtcatctcggccgcctcg
gagtcctatacgggtcgctgctcctcctccctgtcagggttgggcgggcactacacgctg
ggcctgcttcagacgccgcgaagcactgcggacagcaccggcggcttttccagcggcggg
gcggggctcactcccttccgggctgccggcagcggtgggaaggagccgccgcgctccgga
aggggagaatcgtatcttggggacaaaagttcttgtgcagaaaatgctagtgcagtgaat
ttgacaggtggtggttctgcacgaagcctgaataacgcttgtgtaggaaaagtacccttt
tctactaacagatctattggcagaagccatacccctgttacaggatattcagttacatca
tcatctacagcctctgctcatactgctgcatcagttattgtagctgtagtagaaggaaga
ggccttgccagaggtgaagtaggaatggccagtattgacttaaagaatcctgaggtgata
ctatcacaatttgcagacaatacgacttatgccaaggtcattactaaactgaagatttta
acacctctggaaataataatgccaaacacctcttgtgaagcagggaacacaacaaaattg
tttgctttaataacagaacatttcaaaaatgtgacgtttacaaccgtacaaagaaaatac
ttcaatgaaacaaagggtttggagtatatagagcaattatgtgcatctgaattcagcact
gttttcatggagattcaatcaaagtactactgtcttgcagctgctgcagctttgctaaaa
tatgttgagtttattcagaactccatttatgctcctaagtcactcaaggtccacttccag
gggagtgagaaaacagctatgatagattcatcatcagcccaaaatctggaactggtaact
aataacagagattctcggaatggtcacacgctttttggtgtcctaaattacactagaact
ccaggtggaagtcgaagactcagatccaatatcctggagccacttgttgatgctgaaaca
attaaaacaagattggactgtgttcaggaatttctccaggatgaggagctgttttttggt
cttcaagcagttatctccaaattcctggatacagaacaactgctttcaattttggtacaa
attccaaagcaagatacagttaaaactgctgaatcaaaaataagtaatataatctatctg
aagcatactctggaacttgtggagcctctgaaagctgctttaagaaggtgtaacacatca
ctgctaagggcctattacaatgctcttgaagatagaaggtttggaattatacttgaaaag
attacagctgtgattaatgatgatacgagatacgcaaaaggatgtctgagtatgaggacc
cagaaatgctatgctgttaagccaaacatcaatgaattccttgacatagctcgtagaaca
tacacagaaattgttgatgacatagcaggtatgataacacaacttgccgagaagtacaac
ctaccactgaaaacaagtttcagttctgtgcgtggattttttatccagatgaatgctgat
tgttcagcattacccaatggcaaacttccttcagaatttacaaaggtcactaaaacaagg
aacacatatagcttcacttcagcagatttaataaaaatgaatgaaagatgccaggaatcc
ctgagagaaatatatcacatgacctacttaatagtgtgtaaactgctgaatgagatctat
gaacatattcattgtctatacaagctgtctgacattgtgtcgatgctagacatgctgctt
tcatttgctcatgcctgcactatttctgactacgttcgtccagaatttacagatacttta
gcaatcaagcagggatggcatcctattcttgaaaagatagctatggaaaaacctgtgtct
aacaatgcatatctgacagaaggtagcaattttctcattatcacaggaccaaatatgagt
ggaaaatcaacatacataaaacagattgcactctgtcagattatggcgcagatcggttct
tatgtcccagcagagtattgctcttttcgaattgcagagcaaatttttaccagaataggt
atggacgatgatatagaaacaaatgcctcaacattcatgaaggaaatgaaagagataaca
tacatcatacaaaatgctaacgacaaatcactcatcataattgatgaacttggcagaggt
accagtgctgaagaaggtattggtatttgttatgctgcctgtgaatatctcttgaatttg
aaggcatttactttgtttgcaacacatttcctggaactgtgtcatatggatgctttgtat
cccaatgtggaaaattaccattttgaagtgcagcatgtgagaagcagtgctggaaaggag
aagattacgtacacttacacactgtcgaaaggatatacagaggaaaagaactatggatta
aaagctgcagaagtttcctctctaccaccatccataattttggatgcaaaggcaatcaca
aaccatattgcaaaacaaattttgcacagacagagaaccactcctgagatgatgaaacac
agagctgtataccacttagctatgagattggttcagactgctagaaattcgcgattggat
tcggatagcttgcaaatatatttgaaaggcttgaagaaaaagtatacagccagttgtcct
gcatctgaacggagcgatgagcaacattaa

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