Gallus gallus (chicken): 424725
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Entry
424725 CDS
T01006
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gga03036
]
424725 (MSH4)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Meiosis-specific proteins
Others
424725 (MSH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND3
SpoIVA_ATPase
ATPase_2
AAA_23
AAA_18
AAA_30
Motif
Other DBs
NCBI-GeneID:
424725
NCBI-ProteinID:
XP_004936961
CGNC:
8660
Ensembl:
ENSGALG00000011392
LinkDB
All DBs
Position
8:30145368..30177155
Genome browser
AA seq
929 aa
AA seq
DB search
MSNGSSKTEACGQAVISAASESYTGRCSSSLSGLGGHYTLGLLQTPRSTADSTGGFSSGG
AGLTPFRAAGSGGKEPPRSGRGESYLGDKSSCAENASAVNLTGGGSARSLNNACVGKVPF
STNRSIGRSHTPVTGYSVTSSSTASAHTAASVIVAVVEGRGLARGEVGMASIDLKNPEVI
LSQFADNTTYAKVITKLKILTPLEIIMPNTSCEAGNTTKLFALITEHFKNVTFTTVQRKY
FNETKGLEYIEQLCASEFSTVFMEIQSKYYCLAAAAALLKYVEFIQNSIYAPKSLKVHFQ
GSEKTAMIDSSSAQNLELVTNNRDSRNGHTLFGVLNYTRTPGGSRRLRSNILEPLVDAET
IKTRLDCVQEFLQDEELFFGLQAVISKFLDTEQLLSILVQIPKQDTVKTAESKISNIIYL
KHTLELVEPLKAALRRCNTSLLRAYYNALEDRRFGIILEKITAVINDDTRYAKGCLSMRT
QKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYNLPLKTSFSSVRGFFIQMNAD
CSALPNGKLPSEFTKVTKTRNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLNEIY
EHIHCLYKLSDIVSMLDMLLSFAHACTISDYVRPEFTDTLAIKQGWHPILEKIAMEKPVS
NNAYLTEGSNFLIITGPNMSGKSTYIKQIALCQIMAQIGSYVPAEYCSFRIAEQIFTRIG
MDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYLLNL
KAFTLFATHFLELCHMDALYPNVENYHFEVQHVRSSAGKEKITYTYTLSKGYTEEKNYGL
KAAEVSSLPPSIILDAKAITNHIAKQILHRQRTTPEMMKHRAVYHLAMRLVQTARNSRLD
SDSLQIYLKGLKKKYTASCPASERSDEQH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacggcagtagtaagacggaagcgtgcgggcaggcggtcatctcggccgcctcg
gagtcctatacgggtcgctgctcctcctccctgtcagggttgggcgggcactacacgctg
ggcctgcttcagacgccgcgaagcactgcggacagcaccggcggcttttccagcggcggg
gcggggctcactcccttccgggctgccggcagcggtgggaaggagccgccgcgctccgga
aggggagaatcgtatcttggggacaaaagttcttgtgcagaaaatgctagtgcagtgaat
ttgacaggtggtggttctgcacgaagcctgaataacgcttgtgtaggaaaagtacccttt
tctactaacagatctattggcagaagccatacccctgttacaggatattcagttacatca
tcatctacagcctctgctcatactgctgcatcagttattgtagctgtagtagaaggaaga
ggccttgccagaggtgaagtaggaatggccagtattgacttaaagaatcctgaggtgata
ctatcacaatttgcagacaatacgacttatgccaaggtcattactaaactgaagatttta
acacctctggaaataataatgccaaacacctcttgtgaagcagggaacacaacaaaattg
tttgctttaataacagaacatttcaaaaatgtgacgtttacaaccgtacaaagaaaatac
ttcaatgaaacaaagggtttggagtatatagagcaattatgtgcatctgaattcagcact
gttttcatggagattcaatcaaagtactactgtcttgcagctgctgcagctttgctaaaa
tatgttgagtttattcagaactccatttatgctcctaagtcactcaaggtccacttccag
gggagtgagaaaacagctatgatagattcatcatcagcccaaaatctggaactggtaact
aataacagagattctcggaatggtcacacgctttttggtgtcctaaattacactagaact
ccaggtggaagtcgaagactcagatccaatatcctggagccacttgttgatgctgaaaca
attaaaacaagattggactgtgttcaggaatttctccaggatgaggagctgttttttggt
cttcaagcagttatctccaaattcctggatacagaacaactgctttcaattttggtacaa
attccaaagcaagatacagttaaaactgctgaatcaaaaataagtaatataatctatctg
aagcatactctggaacttgtggagcctctgaaagctgctttaagaaggtgtaacacatca
ctgctaagggcctattacaatgctcttgaagatagaaggtttggaattatacttgaaaag
attacagctgtgattaatgatgatacgagatacgcaaaaggatgtctgagtatgaggacc
cagaaatgctatgctgttaagccaaacatcaatgaattccttgacatagctcgtagaaca
tacacagaaattgttgatgacatagcaggtatgataacacaacttgccgagaagtacaac
ctaccactgaaaacaagtttcagttctgtgcgtggattttttatccagatgaatgctgat
tgttcagcattacccaatggcaaacttccttcagaatttacaaaggtcactaaaacaagg
aacacatatagcttcacttcagcagatttaataaaaatgaatgaaagatgccaggaatcc
ctgagagaaatatatcacatgacctacttaatagtgtgtaaactgctgaatgagatctat
gaacatattcattgtctatacaagctgtctgacattgtgtcgatgctagacatgctgctt
tcatttgctcatgcctgcactatttctgactacgttcgtccagaatttacagatacttta
gcaatcaagcagggatggcatcctattcttgaaaagatagctatggaaaaacctgtgtct
aacaatgcatatctgacagaaggtagcaattttctcattatcacaggaccaaatatgagt
ggaaaatcaacatacataaaacagattgcactctgtcagattatggcgcagatcggttct
tatgtcccagcagagtattgctcttttcgaattgcagagcaaatttttaccagaataggt
atggacgatgatatagaaacaaatgcctcaacattcatgaaggaaatgaaagagataaca
tacatcatacaaaatgctaacgacaaatcactcatcataattgatgaacttggcagaggt
accagtgctgaagaaggtattggtatttgttatgctgcctgtgaatatctcttgaatttg
aaggcatttactttgtttgcaacacatttcctggaactgtgtcatatggatgctttgtat
cccaatgtggaaaattaccattttgaagtgcagcatgtgagaagcagtgctggaaaggag
aagattacgtacacttacacactgtcgaaaggatatacagaggaaaagaactatggatta
aaagctgcagaagtttcctctctaccaccatccataattttggatgcaaaggcaatcaca
aaccatattgcaaaacaaattttgcacagacagagaaccactcctgagatgatgaaacac
agagctgtataccacttagctatgagattggttcagactgctagaaattcgcgattggat
tcggatagcttgcaaatatatttgaaaggcttgaagaaaaagtatacagccagttgtcct
gcatctgaacggagcgatgagcaacattaa
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