KEGG T01006: 424754

Gallus gallus (chicken): 424754

Entry

424754            CDS       T01006

Symbol

POLR2D

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

gga Gallus gallus (chicken)

Pathway

gga03020

RNA polymerase

gga03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:gga00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    424754 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    424754 (POLR2D)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    424754 (POLR2D)
   03400 DNA repair and recombination proteins [BR:gga03400]
    424754 (POLR2D)
Transcription machinery [BR:gga03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     424754 (POLR2D)
DNA repair and recombination proteins [BR:gga03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      424754 (POLR2D)

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Tfb4 Maelstrom

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

CGNC:

Ensembl:

LinkDB

Position

9:complement(1632530..1635977)

AA seq 142 aa
MAAGGSDPRTADVEEDASQLVFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY

NT seq 429 nt +upstreamnt +downstreamnt
atggcggcgggtggcagcgacccgaggactgcagatgtggaagaggacgcctcgcagctc
gtcttccccaaagaattcgagactgcagaaactctgctgaattcagaagtgcatatgctt
cttgagcatcgcaagcaacagaacgagagtgcagaagatgagcaggagctgtcagaagtc
ttcatgaagactctgaattacacagcacgcttcagccgcttcaaaaaccgcgagaccatc
gccagtgtccgtagcttgctgctccaaaaaaagctccataaatttgaattggcatgtttg
gccaacttgtgtcctgagactgctgaggaagccaaagctttgattcctagcctggaggga
cgatttgaagatgaggaattgcagcagattcttgacgacattcagaccaaacgcagcttc
cagtactga

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