Gallus gallus (chicken): 424797
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Entry
424797 CDS
T01006
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04382
Cornified envelope formation
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
424797 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
424797 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
424797 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
424797 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gga04147
]
424797 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
gga00536
]
424797 (COL4A3)
Exosome [BR:
gga04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
424797 (COL4A3)
Glycosaminoglycan binding proteins [BR:
gga00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
424797 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
424797
NCBI-ProteinID:
XP_015132475
CGNC:
52259
Ensembl:
ENSGALG00000038612
UniProt:
A0A8V0ZUD8
LinkDB
All DBs
Position
9:9509809..9586899
Genome browser
AA seq
1669 aa
AA seq
DB search
MAGRGCPQRLALLLLLALLWPGRAAAENCVCKGKSPCFCDSVKGNKGEKGFPGVPGPPGH
RGFPGPEGPPGPQGPKGSPGLMGLAGPKGIRGVPGIPGFSGPPGLPGEPGIAGHPGRSGV
PGCNGTKGDRGFPGPPGRRGAPGIPGVDGIKGDKGCPADGYDQGYGAKGDPGFPGIPGPQ
GAQGVQGYPGETGPRGLPGTSGIPGRPGPPGPKGLMGMKVIGTKGRKGDTGLTGPPGPPG
TVIVTLSGPDNMTDLKGEKGEKGSRGLPGPMGFTGPTGDSQSEKGDRGEPGAQGKPGKEG
APGLPGLPGQHGEQGKPGLAGRQGAKGVKGDTGPPGACGRTEYYDVVGEKGDEGPPGPPG
PKGQRGMPGPQGPPGDAGRPGVSRPGLRGPPGFPGPKGTKGEKGQEGSCIVGPPGLPGIT
GRIGSAGLPGPPGEPGRVTFRTGPPGLPGQPGCAGPPGPPGDIGMKGDEACMCTDCSYIP
GTPGLPGSPGPRGQDGIPGREGTPGPKGAPGSPGAPGFPGPQGPPGFKGDQGRKGSKGEP
GYVYPEGPKGEQGDPGARGDKGRKGSSGFLGRPGSKGHKGSKGEEGLAGSKGDRGQPGLP
GNPGLPGEMGLPGLPGYGPQGIRGVKGSKGLPGPHGLPGEAGLKGETIRIAPLPALPGPQ
GPDGLPGSPGVPGRVGTSGQPGDVGHPGPTGDTGFPGLGFPGNPGPKGNKGLPGGRGAPG
CEGKMGEPGRAGNLGQPGEKGDPGIIIPGEPGKLGSPGGRGIPGPKGDTGFPGLPGLPGH
AGRDGNSGLRGDPGSSGVPGDPGFPGKPAECLTGLPGLPGVQGATGPPGRRGSLGSKGKL
GPPGLGIPGIYGKPGEPGLIGLLGNTGLPGLKGQSGRPGVSGVPGPRGEPGIMGPLGIPG
PPGRIGSPGNPGIRGSFGFPGLKGRKGLLGAQGEPGDKGFPGPSETLVVIGNKGEQGSKG
VQGRMGLKGEKGDAGVQGPPGLIGSEGVPGVPGVKGFMGLPGIPGGQGFPGAPGNKGNMG
IPGQKGQKGSPGFPGTSGDPGPTGYGGFPGEKGDPGYPSPGLPGEPGPKGDPGAPGVLGR
KGEKGSQGQPGHNGAPGLHGPRGETGVAGNPGKLGLPGYVGVKGQQGHPGQQGVIGPPGA
AGYPGENGLAGERGNQGQDGMPGPPGAKGEPGAPGRGIPGLQGVPGRRGVKGDMGLPGFP
GPPGMKGLQGDQGPLGPPGLMGLPGFQGATGMAITGPKGNRGIAGADGRPGIPGFQGLPG
LPTMSIKGSKGVRGADGIQGPMGPAGDSGPPGPKGVEGRPGYPGARGDPGFLGFPGVKGE
KGNQGPPGPRGAEGPRGPKGQPGPPGVSERIFSVPGSKGPPGLPGIPGTPGDQGVQGIPG
LQGPKGVKGLPGSFGRPGQPGRPGPKGDRGFPGQRGQPGLIGFPGLQGLPGSPGTITTGP
TRRGFIFTRHSQSTKIPSCPSGTSQIYFGYSLLFVQGNERAHGQDLGTAGSCLQRFTTMP
FLFCNTNDVCSFASRNDYSYWLSTATAMPVDMAPISGKALEPHISRCIVCEGPAMVIAVH
SQTTAVPACPGGWISLWKGFSFVMYTSAGSEASGQALASPGSCLEEFRAIPFIECHGRGT
CNYYTNSYSFWLASLNPRRMFRKPMPQTLKAGELENIISRCQVCMKRPV
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaggggctgcccacagcgcctggcgctgctgctgctgctcgccctgctgtgg
ccgggccgcgccgcagctgagaactgcgtctgcaaaggtaaaagcccctgcttctgtgat
agcgtgaaaggcaataagggtgaaaaaggcttccctggtgttccaggaccacctggtcat
agaggctttccaggtccagaagggcctccaggaccacagggaccaaagggttctccaggg
cttatgggcttagctggacccaaaggtatacggggagtcccaggaatacctggattttca
ggtcccccaggccttccaggtgaaccaggaattgctggccaccctgggcgctcaggtgtt
ccaggttgcaacggcacaaagggtgatcgaggtttcccaggtcctccaggtagaagaggt
gctccaggcattccaggtgttgatggcatcaaaggagataaggggtgccccgcagatgga
tatgaccaaggatatggtgcaaaaggtgatcctggatttccaggaatacctggacctcag
ggtgctcagggtgttcaaggatatcctggggaaactggaccacggggccttccaggaact
tcaggcataccagggagaccaggacctcctggacctaagggtcttatgggaatgaaagta
ataggaaccaaaggaagaaagggagacactggattaactggaccccctggaccaccagga
actgttatcgttacattaagtggaccagacaatatgacggacttgaaaggagagaaagga
gaaaaaggatcaagaggacttccagggccaatgggatttacagggccaactggtgattct
cagagtgaaaagggtgaccgaggagaacctggagcacagggtaaacctggtaaagaaggt
gctccgggtctacctggattaccgggacaacatggtgaacagggcaaaccaggactggct
ggcagacaaggagctaagggtgtgaaaggagacactggtccacctggagcttgtggtcga
acagagtattatgatgtagttggtgaaaaaggagatgaaggacctcctggacctccagga
ccaaaaggtcaacgtggcatgcctgggccacagggtcctcctggagatgctggtagacca
ggtgtgtcaaggcctgggctgagaggtcccccaggatttcctgggcctaaagggacaaaa
ggagaaaaaggacaggagggctcgtgtattgtaggccctccaggactgcctgggattact
ggcagaattggttctgctgggttgccaggtcctccgggagaaccaggtagagtaactttt
agaacaggcccacccggacttcctggacagccagggtgtgcaggacctccaggacctcca
ggagacattggcatgaaaggtgatgaagcttgcatgtgtaccgattgcagctatattccg
ggaacacctggtcttcctggttctcctggaccacgtggccaggatggcatccctggtaga
gaaggaacaccaggtcccaaaggagctccaggttctccaggtgcaccagggtttccagga
ccccaaggacctccaggttttaaaggagatcaaggacgtaagggatcaaaaggtgagcca
gggtatgtgtatccagagggaccaaaaggggagcaaggagatccaggagccaggggagac
aaaggaagaaaaggatcaagtggatttctgggaagacctggctctaaaggtcacaaaggt
tctaaaggtgaagagggattggctggttcaaaaggagatagagggcaacctggattgcct
ggtaaccctggtcttcctggagagatggggcttcctggactgccaggatatggaccacaa
ggaataagaggtgtcaaaggctctaaaggattacctggtccacatggattgcctggagaa
gctggtctgaaaggagagaccattaggatagctccattgcctgcgttgccaggacctcaa
ggaccagatggtttacctggatccccaggagtgcctggtagggttggaacgagtggtcag
ccaggtgatgtggggcatccagggccaacaggtgacacaggctttccagggcttgggttt
cctggaaatccaggcccaaaaggaaataaaggacttcctggaggcagaggggcaccaggt
tgtgaaggaaagatgggagagccaggccgagctggaaatctgggacaaccaggagaaaag
ggtgacccaggcattattattcctggagagccaggcaaactaggttcaccaggaggtcgt
ggcattcctggcccaaaaggtgatactggatttccaggacttccaggcttaccagggcat
gctggacgtgatggcaatagtggcctaagaggagatccaggctcatctggtgttcctggg
gatccaggttttccagggaaacctgctgaatgtcttactggcctgccaggtttgccaggt
gtccagggagctacaggcccaccaggaagaagaggttcactaggttcaaaaggcaaacta
ggtcctcctggcttgggtatcccaggaatctatggaaagcctggggaacctggattaata
ggtcttctgggaaacacaggattgccgggtctcaagggacagtctggaaggccaggagtc
tctggtgtgccaggccctagaggagagccaggtataatgggcccattaggaattcctgga
ccccctggcaggattggaagtccgggcaaccctggtatcagaggctcttttggcttccca
gggctaaaaggaagaaaagggcttcttggagcacaaggtgaaccaggtgacaaaggtttt
cctggaccatctgaaaccttggttgtgattggaaataaaggagaacaaggctcaaaagga
gtccaaggaagaatgggactaaaaggagaaaaaggggatgcaggtgtccaaggtcctcca
ggtcttattggatctgaaggagtacctggtgtaccaggtgtcaaaggatttatgggtctt
ccagggattcctggaggacaaggatttcctggtgcaccaggaaacaaagggaacatggga
attccaggtcaaaaaggacaaaagggttctccaggctttccaggaacttcaggggaccct
ggtccaacaggctatggtggctttccaggtgaaaaaggagaccctgggtacccatctcct
ggactcccaggggaacccggtccaaagggagatccaggggctcctggtgttttgggcagg
aaaggagaaaaaggatcccaaggtcagccaggacataatggagcaccaggactacatgga
cccagaggagaaacaggagttgctggaaacccagggaaacttggacttcctggatatgtt
ggtgttaaaggacaacagggccacccaggacaacagggtgttataggccctcctggtgct
gctggataccctggtgaaaatggacttgctggtgaaaggggtaatcagggtcaggatggt
atgccaggtcccccaggagcaaagggagaaccaggagcaccagggagaggaatccctggc
cttcaaggtgttcctggtcgtagaggagtcaaaggggacatggggcttcctggttttcct
gggccaccaggtatgaaaggtcttcagggtgaccaaggaccccttggacctcctggatta
atgggattacctggatttcaaggagcaacaggcatggcaattactggcccaaaagggaat
agaggcattgctggtgcagatggaagaccaggtattcccggtttccaagggctgcctggt
cttcccactatgagcataaaaggaagcaaaggtgttagaggagcagatggcatacaagga
ccaatgggcccagctggtgacagtggccctccaggtccaaaaggagtagaaggtcgacca
ggttatcctggtgctagaggggaccctggctttctcggatttccaggtgtaaaaggagaa
aagggtaatcaaggaccacctggaccacgaggggcagaagggccaaggggaccaaagggc
caacctggtccacctggtgtctctgagagaatattttctgtcccaggaagcaaggggcct
cctggactgccaggaatcccaggaacaccaggtgatcaaggagttcaagggattcctgga
ctacaaggacctaaaggagtgaaaggtctaccaggaagttttggtcgtccaggtcaacca
ggacggcctggtccaaaaggagacaggggatttccaggacaaagagggcaacctggattg
attggcttccctggcctacagggattgcctggatcaccaggtactatcaccactggtcca
acaagaagaggttttatctttactcgacatagtcaatcaacaaagattccttcatgccca
tctgggacatcacaaatctactttggctattcactgctttttgtacaaggaaatgaacga
gcgcatggacaagaccttggaacagctggtagctgcttgcagagatttaccaccatgcca
ttcttattctgtaacaccaatgacgtgtgcagttttgcttctcgcaatgactattcatac
tggctgtcaactgcaacagcaatgccagtagacatggcaccaatttccggcaaagcacta
gagccccatataagcagatgcattgtctgtgaaggacctgcaatggtaatagcagttcac
agccaaacaactgcagttcctgcatgtccaggaggctggatatctctctggaagggcttt
tcttttgttatgtatacaagtgctggctcagaagcttctggccaagcactggcatctcct
ggatcttgtctggaagaatttagagccatcccattcatagagtgccatggcagggggaca
tgcaactactacacaaactcctacagcttctggttggcatcactaaatccaagaagaatg
ttcaggaaacctatgccacagacgttgaaagcaggagaactagaaaacatcatcagccgt
tgtcaggtctgcatgaagagaccagtctaa
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