KEGG   Gallus gallus (chicken): 424958
Entry
424958            CDS       T01006                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
gga  Gallus gallus (chicken)
Pathway
gga03030  DNA replication
gga03410  Base excision repair
gga03420  Nucleotide excision repair
gga03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    424958 (RFC4)
   03410 Base excision repair
    424958 (RFC4)
   03420 Nucleotide excision repair
    424958 (RFC4)
   03430 Mismatch repair
    424958 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gga03032]
    424958 (RFC4)
   03036 Chromosome and associated proteins [BR:gga03036]
    424958 (RFC4)
   03400 DNA repair and recombination proteins [BR:gga03400]
    424958 (RFC4)
DNA replication proteins [BR:gga03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    424958 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    424958 (RFC4)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    424958 (RFC4)
DNA repair and recombination proteins [BR:gga03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     424958 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    424958 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_assoc_2 Rad17 AAA_lid_RFC1 AAA_16 AAA_11 AAA_22 DUF815 AAA_30 Mg_chelatase SLFN-g3_helicase AAA_14 DNA_pol3_gamma3 AAA_24 AAA_28 RuvB_N AAA_5 AAA_19 TIP49_C ResIII AAA_7 DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 424958
NCBI-ProteinID: NP_001006550
CGNC: 6607
Ensembl: ENSGALG00000008703
UniProt: Q5ZHL1
LinkDB
Position
9:complement(15905441..15916305)
AA seq 359 aa
MQAFLKGPSSISSKPPAAKERSAAGSSGEGNKLKPVPWVEKYRPKNVDEVAFQDEVVAVL
KKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRQRVLELNASDERGIQVIREK
VKAFAQLTASGSRADGKVCPPFKIVILDEADSMTSAAQGALRRTMEKESKTTRFCLICNY
ISRIIEPLTSRCSKFRFKPLSDKIQQQRLLDVSEKENVKITSEAVSYLVKVSDGDLRKAI
TYLQSATRLMGGKEITEKTVTEIAGVIPRETIDGLLSACSSGSFEKLETVAKNLINEGYA
VAQLVNQLHDIVVESEDFSDKQKSIIVEKLAEVDKCLADGADEYLQLISLCALVMQQLT
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgcaggccttcctcaaaggcccgtcctccatcagcagcaagcctcccgccgccaaggag
aggagcgcggcggggagcagcggggaaggcaagaagctcaaacccgtgccctgggtggag
aaatatcgccccaagaacgtggatgaagtcgccttccaggatgaggtggttgctgtgctg
aaaaagtccttggaaggcgctgatcttcccaatctgctgttctatggcccgcctggaact
gggaagacctccactattttagcagctgccagggaactctttgggcctgagctattccga
caaagagtcctggagttaaatgcctccgatgagcgtggaatacaagtgatccgtgagaaa
gtgaaggcttttgctcagctcacagcatctggaagcagagcagatggtaaagtttgtcct
ccttttaagattgtgatcctggatgaagcagactccatgacctcagcagcccaggcagcc
ttaagacgcacaatggaaaaggaatctaaaacaacacgtttttgccttatttgtaactac
atcagcagaataattgaacctttaacatctcgctgctccaaattccgcttcaaacctttg
tcagacaaaatccagcaacagaggctattggatgtttctgagaaggaaaatgtgaaaatc
actagtgaggcagtatcttaccttgttaaagtgtcagatggggacttaagaaaagcgatt
acttaccttcaaagcgccactcgcttgatgggtgggaaggagatcacggagaagactgtc
actgaaattgctggggtcatcccaagagaaacaatagatgggctgctgtccgcctgctcc
agtggttcatttgagaaactggaaacagtggcaaagaatcttataaatgaggggtatgct
gttgctcagcttgtaaaccagcttcatgacatcgttgttgagagtgaagacttcagtgac
aagcagaaatctatcatcgtcgagaagcttgcagaagtggacaaatgcttggcagatggt
gctgatgaatacttgcagttgataagtctgtgtgcccttgtgatgcagcagctaacacga

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