Gallus gallus (chicken): 425418
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Entry
425418 CDS
T01006
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
425418 (SUPT6H)
03036 Chromosome and associated proteins [BR:
gga03036
]
425418 (SUPT6H)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
425418 (SUPT6H)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
425418 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
425418
NCBI-ProteinID:
XP_015151562
CGNC:
75
Ensembl:
ENSGALG00000000146
LinkDB
All DBs
Position
19:5916317..5942115
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVR
KMSDDEDDEEEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPPEEEEEEEEDESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYE
YEDEEAEGETRVRPKKTAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLR
SIPVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQTSSSFSRKGPSTIQKIKE
ALNFMRNQHFEVPFIAFYRKEYVEPELHINDLWSVWQWDEKWTQLKIRKQNLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKAARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQTAGLDGLAKKFG
LTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREP
LVRQVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYLKNKPVKELRDDQFLKMSLAE
EEALLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQF
LYVQMAKELKNKLLVEAKEYVLKACSRKLYNWLKVASYRPDQQVEEDDDFMDENQGKGIR
VLGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFL
LNKKPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSE
NEFRDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYC
EFINRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTM
CHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESA
EDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTP
YRSPNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF
CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVG
MTVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDTEAADHKQEEDMKRKQ
QRTTYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQH
VDVREEGKENAFSLGSTLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDK
KKLEELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQV
FPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMT
SQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPS
YSYTTPSQPITTPQYQVQANTTPQSTQSQTQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcgtagaaagtgaagcagaggagtcagaggaggagtacaaccaagatggg
gaggttgttcccagagtgaccaagaaatttgtagaggaagatgaggatgatgaggaagaa
gaggaggagaatcttgatgatcaagatgagcaagggaacctgaaaggattcattaacgat
gatgacgatgaggaagaggaagaggaggaagaagccagtgactctggggactctgaggat
gatgttggccacaaaaagagaaagcgcacttttgatgaccgcctggaggacgatgatttt
gacctcattgaagaaaacttgggtgttaaagttaaaagacaaaaattcagacgtgtgcgg
aaaatgtctgatgatgaggatgacgaagaggaagactatggtaaggaagaacatgagaag
gaagccattgctgaagaaatctttcaggacggtgaaggagaggagggaggagaagctgtt
gaagctcctgttgcaccaccagaagaggaagaggaggaggaagaagatgaatctgacatc
gatgacttcattgtggatgatgacggacaacctctgaagaagccaaaatggcgaaagaag
ctccctggatacactgatgctgctttgcaggaagcccaggaaatctttggtgtggacttt
gactacgatgagtttgagaagtataatgagtatgatgaggagatggaggaggaatatgaa
tacgaggatgaagaagctgaaggagagacccgtgtccgacccaaaaagactgccaagaag
cgtgtcagtcggcgtagcatctttgagatgtatgagcccagtgagctggagagcagtcac
ctaacagatcaggacaatgagatccgaatgacagacatgcctgagagattccagttgcga
tccatccctgtaaaaagtgctgaagatgatgagctggaggaagaagctgactggatttac
aggaatgcatttgcaacacccaccatctccttgcaggaaagttctgactaccttgatcgt
ggacaaaccagcagcagcttcagccgcaaaggccccagcaccatccagaagattaaagaa
gccctgaatttcatgagaaatcaacattttgaggtcccattcatcgccttctacagaaag
gagtatgtagaaccagagctgcacatcaatgacctgtggagtgtctggcagtgggatgag
aagtggacccagctgaagatccgcaagcaaaacctgacacgtctgtttgagaagatgcag
gcctaccagtatgagcagatctctgctgatccagacaagcctttggctgatggaataagg
gctcttgacactactgacatggaaaggctgaaggacgtgcagtccatggatgagctgaaa
gatgtgtataatcacttcctgctctactatgggcgagacatccccaagatgcagaatgct
gcaaaggctgctcgaaagaagcaaaaacgtatccgagaagatggtgaagaggaggaaggt
gaaggggaggatgcagaagatgatgagcagaaggggcctgagctgaagcaggcttcccgt
cgagatatgtacaccatctgtcaaacagctgggctggatggcctggctaaaaagtttggt
ctgacacctgagcagtttggagagaatctccgagacagttaccaacgtcacgagacagag
cagttccctgcagagcccctggagctggccaaggactatgtgtgtagtcaattcccaagc
ccagaagctgttctggaaggagcacggtacatggtagcattgcagatagccagagagcct
ttggtcaggcaggtcctgagacagactttccaagaaagagctaaaatcaacatttcacca
accaaaaaggggaagaaggatattgatgaagcccactatgcctattcctttaaatacttg
aagaacaagcctgtgaaggagctgcgagacgaccagttcctgaaaatgagcctggcggag
gaggaggcactgctgactatagacatcagcatagacatgaaaggagtggagggttatggt
agtgaccagacatactttgaggaaatcaaacagttctattatcgggatgagttcagccac
caggtgcaggaatggaatcggcagcgtaccatggccattgagcgatccctcaaccagttc
ctctatgtgcagatggctaaagagctgaagaacaagctgttggtggaggccaaggagtat
gtcctcaaggcttgcagccgcaagctgtacaactggctgaaagtagcttcataccgtcct
gatcagcaagtggaggaagatgatgatttcatggatgaaaaccaagggaaaggaattcgg
gtgctaggcattgcattttcctcagccagggaccaccctgtgttttgtgccctcgttaat
ggagagggtgaggttacagacttcctccgactgccacatttcacgaagagaaggaatgcc
tggcgtgaggaagagagggaaaagaaggcacaggatattgaaaccttgaagaaattcctt
ttgaacaagaagcctcatgtggtcacaattgcaggcgagaacagggatgctcagatgctg
atggaggatgtaaagaggattgttcatgaactggatcaggggcagcagctgtcctcaatt
ggagtggagctggtagataatgaactggccatcctctacatgaacagcaagaaatctgag
aatgagttccgggattacccacctttgttacgtcaagcagtttcccttgctcgtcgcatt
caggaccctctcatagagtttgcccaggtctgcagctctgatgaggatattctttgtctg
aaactccatcctctgcaggagcatgtggtgaaggaggatctgctgaatgccctctactgt
gaattcataaaccgagtgaacgaagtgggagtggatgtcaatcgagcaattgctcaccct
cacagccaggctttgctgcagtatgtgtgtggcctgggaccacgcaagggcactcatctg
ctaaagatcttaaaacaaaacaacacacgtctggagaacaggacccagctggttacaatg
tgtcacatgggacccaaggtgtttatcaactgtgcaggcttcatcaaaattgacacagca
tcactgggcgatagtactgattcctacattgaagtcctagatggttccagggtccatccc
gaaacctatgagtgggcaagaaaaatggcagtagatgccttagaatatgatgagtcagct
gaggatgcgaatcctgcaggagccctagaggagatcttagaaaaccctgaacgtctgaag
gacctggaccttgatgcctttgctgaagaactggaaagacagggctatggtgacaagcat
ataactttatatgacatccgagctgaactaagctgcaggtacaaggacctaaggacccca
taccgttctccaaatacagaagaggtcttcaatatgctgaccaaagaaactccagagact
ttttatattggtaaaatgatcatctgcaacgtgactgggatagcacacaggcggccacaa
ggagaaagctatgaccaggcaatacggaacgacgaaactggcctttggcagtgtcctttc
tgtcagcaggataacttcccagagctcagtgaggtttggaatcacttcgacagtggttcc
tgcccaggtcaggccatcggagtgaagacacgtctggataatggtgttgctggcttcatc
ccaacgaaatttctaagtgataaggtggtcaaacgacctgaagaaagggtgaaggtggga
atgactgttcactgcaggattatgaagattgacatcgagaagttcagtgcagatctgacc
tgcaggacctcagacctgatggataagaacaacgagtggaaactgcctaaagacacctac
tatgactttgacactgaggcagcagatcacaaacaggaggaagacatgaagagaaagcag
cagcggacaacatacatcaagagagtaattgctcacccatcattccacaacatcagcttc
aagcaagctgagaagatgatggagaccatggaccaaggggacgtgattattcggccaagc
agcaaaggggagaaccacctcactgtcacctggaaggtgaacgatgggatttaccagcac
gtggatgttcgagaagagggcaaggagaatgccttcagtctgggctctacgctttggatt
aacacagaggaatttgaagacttggatgaaattgttgctcgctatgtccagccaatggct
tcttttgccagagacctgttgaatcacaaatactaccaggattgcaacggtggagacaag
aagaagctggaagagctgctgataaagacaaagaaagagaagccaacgtttattccctac
tttattagtgcctgtaaagatctacctggcaaattcctcttgggttatcagcctcgaggc
aaaccaagaatagagtatgtgacagtgacaccagaaggattccgctaccggggccaggtc
ttccctacagtgaatggactcttccgatggtttaaggatcattatcaggaccctgttcca
ggtattactcccagcagtagcagtcggaccaggactccagcctccattaatgctactcca
gctaacattaacctggcagacctgacccgtgcagtgaacgctctaccacagaacatgact
tcccagatgttcagtgccattgctgctgtgacaggccaggggcagaacccaaatgccaca
cctgcacagtgggcatccagtcagtatggctacggaggcagcggaggtggcagcagtgcg
taccacgtcttcacgactccagcgcagcaaccggtggccacccctctgatgacccccagt
tactcctacacgacccccagccagccgatcacaacgccccagtaccaggtccaggccaac
accacaccccagtccacacagtcccagacacagtcgcagccctcgtccagttcaaggcag
aggcagcagccaaagaccaacagtcacgctgccatcgactgggggaagatggccgagcag
tggctccaggagaaggaggctgagcggaggaaacagaagcagaggttgactcctcgcccg
tctcccagccccatgattgagagcacacccatgtccatcgccggggatgccacaccgctg
cttgatgagatggaccgatag
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integrated database retrieval system
