Gallus gallus (chicken): 425637
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Entry
425637 CDS
T01006
Symbol
VPS4A
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
gga
Gallus gallus (chicken)
Pathway
gga03250
Viral life cycle - HIV-1
gga03272
Virion - Hepatitis viruses
gga04144
Endocytosis
gga04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
425637 (VPS4A)
03272 Virion - Hepatitis viruses
425637 (VPS4A)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
425637 (VPS4A)
09143 Cell growth and death
04217 Necroptosis
425637 (VPS4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
425637 (VPS4A)
03400 DNA repair and recombination proteins [BR:
gga03400
]
425637 (VPS4A)
Membrane trafficking [BR:
gga04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
425637 (VPS4A)
DNA repair and recombination proteins [BR:
gga03400
]
Eukaryotic type
Check point factors
Other check point factors
425637 (VPS4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
TIP49
AAA_16
AAA_22
AAA_14
AAA_5
IstB_IS21
RuvB_N
AAA_25
AAA_17
DUF815
AAA_2
NPHP3_N
AAA_18
AAA_33
nSTAND3
RNA_helicase
YCII
AAA_24
PhoH
AAA_28
ResIII
Mg_chelatase
NACHT
AAA_7
Parvo_NS1
YhdB
bpMoxR
AAA_30
Sigma54_activ_2
TPR_IF140_C
Motif
Other DBs
NCBI-GeneID:
425637
NCBI-ProteinID:
XP_015148165
CGNC:
66170
Ensembl:
ENSGALG00000040713
LinkDB
All DBs
Position
11:18925885..18929114
Genome browser
AA seq
437 aa
AA seq
DB search
MTTTTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSEKAKESIRAKC
VQYLDRAEKLKEYLRSKEKQGKRPVKEAQNDTKGSDSDSEGENPEKKKLQEQLMGAIMME
KPNVRWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNSSDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFKLHLGNTPHSLTEADIHELARKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRG
PSRTNPNLLVDDLLTPCSPGDQGATEMTWMEVPSDKLMEPIVCMSDMLRSLATTRPTVNT
EDLLKVKKFTEDFGQEG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaccaccctgcagaaggccatcgacctggtgaccaaagccaccgaggaggac
aaggccaagaactacgaggaggcgctgcggctgtaccagcacgccgtggagtacttcttg
cacgccatcaaatatgaggcgcacagcgaaaaagccaaggagagcatccgcgccaagtgc
gtgcagtacctggaccgggccgagaagctgaaggagtacctgcgcagcaaggagaagcag
ggcaagaggccggtcaaggaggcacagaacgacaccaaggggagcgacagtgacagcgag
ggtgagaacccggagaagaagaaactgcaggagcagctgatgggtgccatcatgatggag
aagcccaatgtgcggtggagcgacgtggctgggctggagggagccaaggaggccctgaag
gaagccgtgatcctgcccatcaagttcccacacttgttcactgggaagcgcacgccctgg
cgagggatcctgctcttcgggcctcctggcactgggaagtcctacttggccaaggccgtg
gccactgaggccaacaactccactttcttctccgtgtcatcctcggacctgatgtcaaag
tggctgggagagagcgagaagctagtgaagaacctctttgagctggcgaggcagcacaaa
ccctccatcatcttcatcgatgaggtggactcactgtgcggctcccgcaatgagaatgag
agtgaggcggcccggcgcatcaagacagagttcctggtgcagatgcagggtgtgggcaac
agcagtgatgggatcctggtgctcggtgccaccaacatcccctgggtgctggactcggcc
atcaggaggaggttcgagaagcgcatttacatcccactacctgaggaggcagcccgggcc
cagatgttcaaactgcacctgggcaacaccccacactctctgacggaggctgacatccac
gagctggcacggaagacagatggctactctggggctgacatcagcatcattgtgcgggat
gccctgatgcagcctgtccgcaaggtgcagtcagccacgcacttcaagaaggtccgcggt
ccctcccgcaccaaccccaaccttctggtggatgatctcctgacgccgtgctcgcctggg
gaccagggtgccaccgagatgacctggatggaggtgcccagtgacaagctgatggagccc
atcgtctgcatgtcggacatgctgcgctccctcgccaccacccgccccaccgtgaacacc
gaggacctcctgaaagtgaagaagttcacagaggactttgggcaggaaggttaa
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