Gallus gallus (chicken): 426072
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Entry
426072 CDS
T01006
Symbol
TMF1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gga04131
]
426072 (TMF1)
Membrane trafficking [BR:
gga04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
426072 (TMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
CCDC39
ATG16
SlyX
Motif
Other DBs
NCBI-GeneID:
426072
NCBI-ProteinID:
XP_423749
CGNC:
10087
Ensembl:
ENSGALG00000013408
UniProt:
A0A8V0Z5M4
LinkDB
All DBs
Position
12:complement(15693744..15706760)
Genome browser
AA seq
1105 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQAEESPWPDAVIPDYGDGTNSLISGGWDTS
SWGLSSNTEPQNQPVSPTAITKPVRRAVVDESENFFSAFLSPTDVQSIQKSPVVSKPPAK
SQRPKEEVKSTLKEPQHFSQLEVLVTTEAEVKDSSVGGLVDLKNRDSPKEKLGENSVLKS
NAEHEESTNEVADKKASALNLKEPEDALNGKSNVGADRTGGALDSNSQPPNTGTKDAALE
TKEQKTEDRQSNTPSPPISTFSSGTSTTSDIEVLDHESVISESSVSSRQEAADSKSSLHL
MQTSFQLLSTSACADYNRLDDFQKMTESGCSSDAFERIDSFSVQSLDSRSVSEINSDDEL
SGKACGSASVAISPSAPKTETVDTLKSKSEDVNESPVVHTEEAEMEESGRSATPVNSEQP
DVLLSAVQTEEQVGKEETEPQPDADGKVLEEDSEMEKLKKMIDSLTEKLEKRETQLLSTS
KEKARLEEAYDNLKDEMFRVKEETSSISSLKEEFAQRIADAEKKLQVACKERDAAKKEVK
TVKEELATRLNTNETAELLKEKEEQIKGLMEEGEKLSKQQLHNSNTIKKLRAKEKERENI
NTKQNKKIKELEEELQHLKQVLDGKEDLEKQHRDSIKQLNIVVERQEKDLAKLQAEVEDL
EERNRSVQAALDSAYKELADLHKANATKDSEAQEAALSREMKAKEELGLALEKAKDEARQ
QQEALAIQVADLRLALQRAEQQAARKEDYLRQEISELQQRLQEAESRNQELSQSVTSATR
PLLRQIENLQATLGAQTSAWEKLEKNLSDRLGESQTLLAAAAERERAATEELMSNKVQMS
STESQNSRLRQENSRLQAQVEMERNKLKKMEVENSRYEVELEELKDEYAKTLEDAKKEKA
LLTTQLEMEKMKIEQERKKAIFAQEAAKEKDRKSFTIETVSSTPTMSRSSSISGVDMAGL
QTSFLSQDDPHDHSFGPTATSGSNLYDAIRMGAGSSIIENLQSQLKLREGEISHLQLEIG
NLEKTRSIMAEELVKLTNQNDELEEKVKEIPKLRAQLKDLDQRYNTILQMYGEKAEEAEE
LRLDLEDVKNMYKTQIDELLKQRQN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaacgcctcacagctgtccagcttcgctaagcaggcgctgtcccaggcc
cagaagtctatagaccgggtgttggacatccaggccgaggagagcccctggcccgacgcc
gtcatccccgactacggcgacggaacaaattctctcataagtggaggatgggatacctct
tcatggggtttaagttcaaacacagaaccacagaatcagccagtatcaccaacagcaatc
accaaaccagtgaggagagcagtagtagatgagtctgaaaacttcttcagtgcctttctc
tctccaacggatgttcagagtatacagaaaagtccagtggtgtccaaacctccggccaaa
tcgcagcgacccaaggaggaggtgaaaagcactttaaaggaacctcagcacttcagtcag
ctggaagtactggtgactacagaggcagaagtgaaggattcctctgtaggtggcctagtg
gacttgaaaaaccgtgatagtccaaaggagaaactaggagagaattctgtgcttaaatct
aatgctgagcatgaagaaagcacaaatgaagttgctgacaaaaaggcgtctgctctaaat
ttgaaagaacctgaggatgctcttaatggaaaatccaatgtgggggcagatagaactgga
ggtgcgctggatagcaactcacagcctcctaatacaggtacaaaagatgcagccttggaa
actaaggaacaaaaaactgaggacaggcaaagcaatacaccatcacccccaataagcact
ttctcctcggggacatccacaactagtgatattgaagttttggaccatgaaagtgtaata
agtgagagctcagtaagttcaagacaagaagctgcagattcaaaatccagtcttcatcta
atgcaaacgtcgtttcagcttttatctacatctgcctgtgcagactataatcgtttggat
gactttcaaaaaatgaccgaaagcggctgctcctctgatgcttttgaaagaatagattca
tttagtgtgcagtctttggatagtagaagtgtaagtgaaataaattcagatgatgaatta
tcaggcaaggcttgtggttcagcatctgttgctatcagtccttctgcaccaaagacagaa
acggttgacaccctgaaaagtaagtctgaagatgtgaacgaaagtcctgtggtacacact
gaggaagctgagatggaagagagtgggagaagtgcaacacctgttaattctgagcagcca
gatgttttgctgtctgccgtgcaaactgaggaacaggttgggaaagaggagactgagcct
cagcccgatgctgatggaaaggtgctggaagaggactctgaaatggaaaagcttaaaaag
atgattgattcattaactgagaaactggagaagagggaaacacagttactgagtacaagt
aaagagaaggcacggctggaagaagcttatgataacctaaaggatgaaatgtttagagtg
aaagaagagaccagcagcatttcatctcttaaggaggaatttgcacagcgaatagcagat
gctgaaaagaagctccaggtagcatgcaaagaaagagatgcagctaaaaaggaagtaaag
accgttaaagaggagttggctactagacttaataccaatgaaactgctgaattactgaaa
gaaaaagaagagcaaatcaaaggattgatggaggaaggagaaaaactttccaaacaacag
cttcacaattccaacactattaagaaattaagagcaaaggagaaagaaagagaaaatatt
aacacaaaacagaacaaaaagattaaggaactggaagaagagttgcagcacttaaaacag
gtacttgatggcaaggaagaccttgagaagcagcatcgagacagcattaaacaactgaac
attgttgtggagcgacaagaaaaggatcttgctaagcttcaggcagaagtggaagacctt
gaagaacggaacagaagtgtccaggcagcacttgacagtgcatacaaagaacttgcagat
cttcataaagctaatgctacaaaggacagtgaggcacaagaagccgccctgagtcgggaa
atgaaggcaaaggaagagcttgggttagcactggagaaggccaaggatgaggcacggcag
caacaggaagctttggcaattcaggtggcagacctgaggctagctctgcaacgtgcagaa
cagcaggcagcgagaaaagaagactatttacgtcaggaaatcagtgaactacagcagaga
ctccaggaagcagagagccggaaccaagaactaagtcaaagtgttacttctgctacacgc
cctcttctccggcagatagagaatttgcaagccactctgggagcacaaacctctgcgtgg
gaaaaattggaaaagaacctttctgacagacttggtgagtctcaaactcttctagcagca
gctgctgagagagaacgggctgctacagaagagcttatgtctaataaagttcagatgtct
tctactgagtctcagaacagtcgcttaaggcaagagaatagtcgcctccaggctcaggta
gaaatggagagaaacaaactgaagaaaatggaagttgaaaacagtaggtatgaggttgaa
ctagaagaactcaaagatgaatatgcaaaaactttggaagatgcaaagaaagaaaaggca
ctgctgactactcaattagaaatggagaaaatgaagattgaacaggaaagaaagaaggca
atttttgcacaagaagcagcaaaggaaaaggatcggaagtcatttacaattgaaactgtt
tcaagcactccaactatgtcacgctctagttccataagtggagttgatatggcaggtctt
cagacctcttttctgtcacaggatgatcctcatgatcactcatttggaccaacagctacc
agtgggagcaatctttatgatgctataaggatgggagcaggttcaagtataattgaaaac
cttcaatcacagttaaaactaagagaaggagagatctcacatctacagctggaaattgga
aaccttgaaaaaactagatcgataatggcagaagaattggtcaaattaacaaatcaaaat
gatgaacttgaagaaaaagtgaaggaaataccaaaattgcgtgcacagttaaaggacttg
gatcaaaggtacaataccattcttcagatgtatggggagaaagcagaggaagctgaagaa
ctccggctagatcttgaggatgtgaaaaacatgtataagactcagatagatgaactttta
aaacaaagacaaaactaa
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