KEGG   Gallus gallus (chicken): 426855
Entry
426855            CDS       T01006                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
gga  Gallus gallus (chicken)
Pathway
gga04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:gga00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    426855 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gga04131]
    426855 (WDR7)
Membrane trafficking [BR:gga04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    426855 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_TEP1_2nd WDR55 CFAP251_N ASA1 Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 Beta-prop_IFT140_1st DSE1_N Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_HPS5 PAC11 Beta-prop_WDR19_1st WDR72_alpha-sol KNTC1_N WDR90_beta-prop_4th Tricorn_2nd PD40 DNAI3_WD Arminin
Other DBs
NCBI-GeneID: 426855
NCBI-ProteinID: XP_004949047
CGNC: 2184
Ensembl: ENSGALG00000032776
UniProt: A0A1D5PJ83
LinkDB
Position
Z:complement(805920..921704)
AA seq 1487 aa
MAGNSLVLPIVLWGQRAPTHCISTLLLMDDTSMIITGCHDGQICLWDIAPDLEINPRALL
FGHTASITCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFM
VGTQREGRLLCHGHYPEILVVDATSLEVLYSLLSKISPDWISSMTIIKSNRTQEDTVVAV
SVTGILKVWIITSEVNRMQDTTPVFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSVPSENEQTWTGGDFVSADKVIVWTEDGQSFIYKLPASCLPASDLFRRDV
GKAVENLIPPLLYSVLDRADKQLLICPPVTRFFYGQREFFSNLLIQGDSSGRLCIWSIPD
TLEQQDCAKGLQTTTSISLQEAFDKLTPRPAGIIDQLSLIPNIKEPLKVTASVYIPAHGR
LVCGREDGSIVIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKITCLLYPHQVSSRY
DQRYLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDH
SVGLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMG
ITAVEILNACDEALPAAVDSLSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEA
SDKGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNSALISPENL
QKASGGSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEDEDEDSVRQRREDTDPEY
RSGKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSR
GGHMSLMLPGYNQPVGKPSYDGMELGRKMSITEGLGKGTYGVSRAVTTQHLLSVISLANT
LMSMTNATFIGDHMKKGPTRPPRPGTPEMSKMKAPPSMASHAAQGQIKQVAPAVSSSTEA
GHSGSDTAPPLHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKETIDAWAPYLPQYIDSVISPGVTTEAIQTATASPDSLGT
EAKVQEEEHDLVDDDISAGCLSGLPQLKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPAHSTIRRTAID
LIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIA
TARPPAFITTIAKEVHRHTALAANTQSQQNIHTTTLARAKGEILRVIEILIEKMPTDVVD
LLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERSHRIAVGARHGSVALYDIR
TGKCQTIHGHKGPITAVAFAPDGRYLATYSNSDSHLSFWQMNTSLLGSIGMLNSAPQLRC
IKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFVV
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggctgggaacagccttgtgttgcccattgtcctgtggggccagagggctcccacccac
tgcatatcaacactgctgctcatggatgacacgtcgatgatcatcactggctgccacgat
ggccagatatgtctctgggacattgctccagatttagagattaaccccagagctctgctg
tttggtcatacagcctcaatcacttgtttatcaaaggcctctgcttccagtgagaagcag
tacatagtgagtgcgtcagagagtggggagatgtgtctgtgggatgtgaatgatggcaga
tgcatagagtttactaagctagcctgcacacacactggcatacagttctaccagtttatg
gttgggactcagcgtgaagggagactgttatgccatggacattatccagaaattcttgtt
gtggatgctaccagccttgaagttctttattctttattatcaaagatatctcctgattgg
atcagctccatgactatcattaaatccaacagaacacaagaggatactgttgttgcagtt
tcagtgactggcatcctgaaagtatggataataacatctgaagttaatcgcatgcaggat
acaacaccagtatttgaagaggagtcaaaacctatttattgtcaaaactgtcagagtatt
tctttctgtgcatttacccagcggtcgttgttggtagtgtgctctaaatactggagggtt
tttgatgctggagattattcccttttatgctcggtccctagtgagaatgaacagacctgg
actggtggtgactttgtgtcagctgataaggtgatcgtgtggacagaagatggtcagagt
ttcatatataaattaccagccagctgtcttccagccagtgacttgtttcgtagagatgtg
gggaaagcagtagaaaacttaattcctcctttattgtacagtgtactggacagagcagat
aaacagttactgatatgtcccccagtcacccggttcttctatggacaaagggagtttttc
tctaatctgctgatccaaggagactcttcagggaggctgtgcatttggagtatacctgat
acactggaacaacaagactgtgcaaaaggactgcaaacaacaacttcaatatccctccag
gaagcttttgataaacttactcctcgcccagctggaattatagaccaactaagcttaata
ccaaacatcaaggagccacttaaggttacagccagcgtgtacattccagcccatgggcgg
ttggtttgtggtcgggaagatggaagcattgttattgtgccagcaacccaaactgctata
gttcagcttttgcaaggagagcatatgctcaggagaggttggccacctcaccggactctc
agaggtcatcgaaacaaaattacttgcttactgtatcctcatcaggtttcttctcgttat
gatcaaaggtatttgatctcaggtggtgtggatttctcagtcatcatatgggatatattt
tctggagagatgaaacatatcttctgtgtacatggtggagaaattacacagcttctagtt
ccaccagaaaattgtagtgcaagagtccagcactgtatttgctctgtggccagtgatcac
tctgtaggtcttcttagtctgcgtgagaaaaaatgcatcatgctggcatcccgccacctc
ttccctattcaagtgatcaagtggaggccttctgatgactacctggtagtgggatgctct
gacgggtccgtgtatgtctggcaaatggatactggtgctctggacagatgtgtgatggga
ataacagcagttgaaatcctgaatgcctgtgatgaggcactgcccgcagctgtggactcc
ctgagccaccctgctgtcaacttgaagcaggccatgacacgacgcagcctggctgccctg
aagaatgtggcacaccagaagctgcagaccttggccaccaacctgctggcttctgaggca
tctgacaaagggaatttacctaaatattcacataactctctgatggttcaagctataaag
actaacttgacagatccagatatacacgtgctcttctttgacgtggaagcactgataatt
cagctgctgaccgaagaagcctcaagacccaacagtgccctcatctctccagagaattta
cagaaggcctctggtgggtctgacaagggaggctccttcctgactggtaagcgagcagct
gtcctcttccagcaggtcaaggaaaccatcaaagaaaacataaaggaacatcttcttgat
gatgaagacgaggatgaagactcagtgagacagagaagagaagacactgacccagaatat
cgttctggcaaatccaaaccattaactctactagagtacaacctaaccatggatacagca
aagctttttatgtcctgtcttcatgcatggggcttgaattctgttctagatgagctttgc
cttgatcgtctcgggatgcttaagccacactgctcagtgtcctttggccttctgtctaga
ggaggccacatgtctctgatgcttcctggctacaatcagcctgtaggcaaaccatcttat
gatggcatggagttgggcaggaagatgtccattacagaaggattgggaaaggggacatat
ggcgtgtcacgtgctgtcaccacccagcatctcctctctgtcatatcgctggcaaacacg
ctgatgagcatgaccaatgcaacctttattggagaccacatgaagaagggcccaaccagg
ccacccaggccaggcacacccgaaatgtcaaaaatgaaggcacctccatcaatggcaagt
catgcagcccaaggacaaattaaacaagttgctcctgctgtttcttctagcactgaagct
ggtcactctggctctgacactgctcctcctttacatacctgtttcttagtaaatgaaggg
tggagccagcttgctgccatgcactgcgtgatgctgccagacctgctgggtctggacaag
ttcaggcctcctcttctggagatgttggctcgcagatggcaggaccgctgcctggaggta
agagaagctgcccaggccctgctgctcgcagaactgaggaggattgaacaggcaggccgg
aaggagaccattgatgcttgggctccatatttgccacagtacattgacagtgtcatatcg
cctggagtaaccactgaagccattcaaactgctactgcaagcccagattccttgggaaca
gaggcaaaagttcaggaggaagaacatgatctagtggatgacgacatctcagcaggctgc
ctgtccggtctcccacagctaaagaagatctctacatcctatgaggagcgcaggaagcaa
gctacagccatcgttctgctgggtgttatcggggcagaatttggggctgagattgagccc
cctaagctgctcacacggccacgcagctccagccagatccccgagggctttgggctgaca
agcggtgggtccaattattccctggcaaggcatacctgcaaggcattgacatttctgctg
ctacagccacccagccccaagctgcctgcgcacagcaccatccgcagaactgccattgac
ctcatcggccgtggcttcactgtctgggagccctacatggatgtctctgcggtgctgatg
ggcctgctggagctctgcgctgatgctgagaagcagcttgccaacatcacaatggggctg
cccctgagcccggcggcggactctgcacgctcggcacgccacgcgctctcgctcatcgcc
acagcccggccgcccgccttcattaccaccatcgccaaggaggtgcacagacacaccgcc
cttgcagcaaacacacagtctcagcagaatattcacaccactactcttgctcgggctaaa
ggagagatcttgagagtcattgaaatccttattgagaagatgcctaccgacgtcgtggac
cttcttgttgaggttatggacatcatcatgtattgcctcgaaggatctttagttaagaaa
aaaggtcttcaagaatgctttccagccatctgcaggttctacatggtcagctattatgag
cgaagtcacagaatagcagttggagctcgccatggttcagtggccctctacgacatccgg
actgggaaatgtcagacaatccatgggcacaaggggccgatcacggcagtggcctttgct
cctgacggccggtacctcgccacctactccaactcagacagccacctctccttctggcag
atgaacacgtcactgctgggcagcatcggcatgctcaactcagcaccccagctgcgctgc
atcaagacctaccaggtgccacctgtccagcccgcttcccctggctcgcacaacgccctg
cgcctggcccgcctcatctggacctccaaccgcaacgtcatcctcatggcccatgatggc
aaggagcaccgcttcgtggtctag

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