Gallus gallus (chicken): 426869
Help
Entry
426869 CDS
T01006
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha isoform X2
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
426869 (SCN8A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gga04040
]
426869 (SCN8A)
Ion channels [BR:
gga04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
426869 (SCN8A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
426869
NCBI-ProteinID:
XP_003643160
CGNC:
4545
Ensembl:
ENSGALG00000043728
LinkDB
All DBs
Position
34:complement(237020..288841)
Genome browser
AA seq
1978 aa
AA seq
DB search
MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSVFSMIIMCTILTNCVFMTFSNPPEWSKNVEYTFTGIYTFESLVKIIAR
GFCIDGFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETYLDNGSRGF
DWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAF
LALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQA
TLEEAEQKEAEFKAMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISK
LSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSI
MNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIP
IRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRL
LPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPC
WYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFE
HVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLANVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYK
ECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQAH
FKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDED
HMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPE
VEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFET
FIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTN
AWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIEIVNNKTDCEALMPP
NSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYI
YFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQK
PIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINLVFV
IFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLA
RIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGI
DDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVG
IFFFVSYIIISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQF
IEYSKLADFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGEL
DILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLP
TKMENGGTNREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERAKRQKDVRESKC
NT seq
5937 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacggctgctcgcaccaccaggccctgatagttttaaacctttcactccggag
tctctggctaacattgagaaacgcattgcagaagaaaaaaagaagaagcgtccaaagcaa
gacagcagccatcgcgacgacgatgaagacagcaaaccaaaaccaaacagtgaccttgag
gcggggaagaatttgcctttcatctatggggacatccctaaaggcctggttgctgtacca
ctggaggactttgacccttattatatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctg
tttagaagaatagctattaaaattttgatacattcagtatttagcatgatcattatgtgc
actattttgaccaactgtgtattcatgacttttagtaacccacctgaatggtcgaagaat
gtggagtatacattcactggtatttatacatttgaatcacttgtgaaaattattgcaaga
ggtttctgtatagatggctttactttcctacgagacccatggaactggctagatttcagt
gtgatcatgatggcatatgtcacagagtttgtggacctggggaatgtctcagcattgaga
actttcagagttctccgagctttgaaaactatctctgtaattccaggcctgaagaccatt
gtgggtgccctgatccagtcagtgaagaagctgtcggatgtgatgatcctgacggtgttt
tgcctcagtgtctttgctctgattgggctgcagctgtttatgggcaatttgaggaacaag
tgtgtgatatggccaattaatgtgaacgagacgtacctggataacggctcccggggcttt
gactgggaggaatacaccaacaatatgtcaaatttttacataattcctggtgcccctgat
cctttgctctgtggtaacagctccgatgcaggtcaatgtccagagggttacacatgcatg
aaagcaggacggaacccaaactacggttacacgagctttgacactttcagctgggctttc
ctggctctgtttcgccttatgactcaggacttttgggaaaacttgtatcaattaacctta
cgagcagctggaaaaacctacatgatcttctttgtcctggtgatcttcgtgggctcgttc
tatctggtcaacctgattctggctgtggtggccatggcttacgaagagcagaaccaggct
acgttggaggaggcagagcagaaagaggccgaatttaaggccatgttagaacagttgaaa
aagcagcaggaggaggcacaggctgctgccatggtcacttctgcagggacggtctctgag
gatgctgtggaagatgatggtggtgggaggatgtctcggagctcatcagagatctctaaa
ctgagttccaagagtgccaaagagcgccgtaaccggaggaagaagcggaaggacaaagag
ctgtcggaaggggaggagaagggagacaacgagaaagtgttcaagtctgaatcagaggat
ggcatgaggagaaaagccttcaggctgccagataacagaataggaagaaagttttccatc
atgaaccagtctctcctcagcatcccgggctcccctttcctctcccgacacaacagcaag
agcagcatcttcagctacaagggccgattccgcgacccgggctcggagaatgaattcgcc
gacgacgaacacagcacggtggaggagagcgaaggccgcagggattccctcttcatcccc
atccgcggccgcgaccgacggagcagctacagcggatacagcggctacagccagggcagc
cgctcctcgcggatattccccaacctccgccgcaacatcaagaggaacagcacggtggat
tgcaacggcgtcgtgtccctcatcggcggcccgccttccagcatgcccggcgggcgcctt
ctgcctgagggtacgactgaaattgaaattaagaagaaacctggtgggtctctcttggtc
tcgatggatcaggtgaacgcctcctatggaaggaaggatcgtaccaacagcgtgatgacc
ggcttgaccaacaccctcgttgaggagctggaggagtcccagaggaagtgtcccccatgc
tggtacaaatttgccaacacattcttgatctgggaatgccacccctactggatcaagctg
aaggagatagtgaacttaatcgtcatggatccctttgttgacctggccatcaccatctgc
attgtgctcaacactctgttcatggcaatggagcaccatcctatgaccccagagtttgaa
cacgtgctctccgtaggaaatctggttttcacgggaattttcacagcagaaatgttcctg
aagctcatcgccatggatccctactattatttccaggaaggctggaacatctttgatgga
ttcatcgtctccctcagtttaatggagctgagtctggcgaatgtggaggggctctctgtg
ctgcgatctttccgattgctgagagtcttcaaactggccaagtcctggcccactctgaac
atgctgataaaaatcatcggtaactcagtgggtgctttgggcaacctgaccttggtgttg
gccatcatcgtcttcatctttgcggtggtgggcatgcagctctttggcaaaaactacaag
gagtgtgtctgcaagatcaatccggagtgtgagctaccccgctggcacatgcacgatttc
ttccactccttccttattgtcttccgtgtgttgtgtggggaatggattgagaccatgtgg
gattgcatggaggtggcaggacaggccatgtgcttgattgtcttcatgatggtcatggtc
atcggaaatttagtggtgctgaacctgttcctggctttgctgctgagctccttcagtgca
gacaacctggcagcaacggatgacgatggggagatgaacaacctgcagatctctgtcatt
cgcatcaagaagggcattgcctggaccaaggcgaaagtgcgtgaattcatgcaggctcac
ttcaagcagagagaggcagatgaggtcaaacccttggacgagctgtatgacaagaaggtg
aactgcattgccaaccacacgggggctgatatccacagagacatcgattatcagaagaac
ggcaatggcacaaccagtggaattgggagcagcgtggagaaatacatcattgatgaagac
cacatgtccttcatcaacaaccccaacctcaccgtccgggtgcctattgctgtcggggag
tcagactttgaaaatctcaacacagaagatttcagcagcgatacagaccctgatggcagc
aaagagaaactggatgataccagctcctccgaaggcagcaccattgatataaagcctgaa
gtggaagaagtccctgtggaggcaccagaagagtatctggacccggatgcatgcttcact
gagggttgcatgcagcgctgtaagtgttgtcaggtcaatattgaggaggggctggggaag
tcctggtggactttgaggaagacgtgttttctgatcgtggagcacaactggtttgagact
ttcatcatcttcatgatcctactgagcagtggagctctggcttttgaggatatttacata
gaacagaggaaaaccatccggaccatcctggagtacgcagacaaggtcttcacgtacatt
ttcatcctggagatgttgctgaaatggtgcgcctatggattcgtcaagttcttcaccaac
gcctggtgctggctggatttcctcattgtggctgtctctttagtcagccttatagctaat
gccctgggctactcggaactaggtgccataaagtcccttaggaccctaagagctttgagg
cctttaagagcgttgtcccgatttgaggggatgagggtggttgtcaatgccttggttggc
gctatcccttctattatgaatgtcttgttggtctgccttatcttctggctgattttcagc
attatgggggttaacctgtttgctgggaaatatcattactgctttaatgaaacatctgag
gagcgctttgaaatagagattgttaacaacaagacagactgtgaagcgctgatgccgccc
aactccactgagatccgatggaagaatgtgaaaatcaactttgacaacgttggggcagga
tacctggctctcctgcaagttgcaacattcaagggctggatggacatcatgtatgcagca
gtagattccagaaagcaagaagagcaacccaagtacgaggacaacatctacatgtacata
tattttgttatcttcatcatctttggctcctttttcactctgaacttgttcatcggtgtc
atcattgacaacttcaatcaacaaaagaaaaagtttggaggtcaagatattttcatgaca
gaagaacaaaagaaatactacaatgccatgaaaaaactgggctccaagaagcctcaaaag
ccaattccccgacctctgaaccgcattcagggagctgtctttgactttgtcactcagcaa
gcattcgacatcgtcatcatgatgctcatctgcctcaacatggtgaccatgatggtggag
acggacacacagagcaagcagatggaggacatcctctactggatcaacctggtgttcgtc
atcttcttcacctgcgagtgtgtgctgaagatgttcgccttgcggcactactacttcacc
attgggtggaacatctttgacttcgttgttgtgattctgtccattgtgggaatgttcctg
gctgaaatcatcgagaagtattttgtatcccccactctcttccgagtcatccgcctggct
cgtattggacgtattctgcgtttgatcaaaggagccaaagggatccgcaccttgcttttt
gccttaatgatgtctttgcctgccttgttcaacatcggcctcttgctgttcctggtcatg
ttcatcttctccatcttcggcatgtccaactttgcctacgtcaagcatgaggctggcatc
gatgacatgttcaactttgagacctttggcaacagcatgatctgcttgttccagatcacg
acgtcggccggctgggatggcctcctgctgcccatcctaaaccggcctccagactgcgac
ctggacaaggagcatcccgggagcggctttaagggggactgcgggaacccctcggtgggg
atatttttctttgtgagctacatcatcatctccttcctgatcgtggtcaacatgtacatc
gccatcatcctggagaacttcagcgtggcgacggaggagagcgcagacccgttgagcgag
gacgacttcgagaccttctacgagatctgggagaagttcgaccccgacgccacgcagttc
atagagtacagcaagctggcggactttgcagatgctttggaacatcctctgcgcgtccca
aagcccaacaccatcgaactcatcgccatggacctccctatggtaagtggagacaggatc
cactgtttagacatcctgtttgccttcaccaaacgcgtcctgggggacagcggagagctg
gatatactgagacaacagatggaggaaaggtttgtggcttccaacccttccaaagtgtct
tacgagcccatcaccaccacgctgcggcgcaagcaggaggaggtctcggccgtggtgttg
cagagggcttacaggtcgcggttggcgaggcgggggttcatcagccgaagacccctcccc
accaaaatggaaaatggtggaacgaacagggagaagaaggaagggacgccctccactgcg
tcgctgccgtcctacgacagcgtcaccaaacctgagaaggagaagcagcagcgggcggag
gagggaagacgggaacgggcgaaaaggcaaaaagatgtcagggaatccaagtgttga
DBGET
integrated database retrieval system
