Gallus gallus (chicken): 427088
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Entry
427088 CDS
T01006
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1 isoform X1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gga03037
]
427088 (USHBP1)
Cilium and associated proteins [BR:
gga03037
]
Primary cilia and associated proteins
USH complex and associated proteins
427088 (USHBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF842
ALIX_LYPXL_bnd
AKNA
DivIC
DASH_Dam1
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
427088
NCBI-ProteinID:
XP_015155583
CGNC:
52987
LinkDB
All DBs
Position
28:complement(3480548..3484736)
Genome browser
AA seq
948 aa
AA seq
DB search
MQIFLHSRTLSRVRAPSWLHGHPRAGEGPVWGRAGLRGGDGVPQSPPGVAVTRRRAAQRL
SAGCSGAAEEEEISAGTRSGQGQGRPRGAPPAAGSAHCRIRSLWGRAVGPGAGRRRAMEE
ASGASPRARGAAGPQSSIVVPISAKLHPQLHRHPPAPSDPQGQAGQSPRAPLRLAGERLD
EDEDRDEDEDEDEDEDAAAAGDEEHITTLLACTDPHSTRPLPHRDQEEHSGCTGSPHPHG
QQPRGLDGAGTEAPHPDLFAALQHAVSSLERAVISRHRCTPAPPAEWAQSLEELQRVAGP
CQGLGRGEGLLEEAERNAALRAALGDRDEELSRTTDALRALQGERERLQGKVGVGRHRGE
PHGLGPGLSMVLTQVWELQEALARLEGTGGAGGDTTGLSGAPGPGDPQDLSGCILSCDDA
QPHGAQPHSPLSPPPSEGASRELEQRMQQLQGHMERLKEVNQQLSAALRDCKSDSERLSM
VLGQHESRSSALHLALHCSERCVDAYAALLERMWAKLGRDGHGPSAGATGEQSTEHSCGS
SPTQRLQLPDQAEPKRQEGSRVTSCPGLHSTHGSEEGALREAIRQLRAEQAAVQMSLHHV
PTPSRAPSRRAEDACARAERALRDARALLPGWRRPERAELLREVAELKVSAAGSPGEVTA
GGDGDGDGAALPGGHGRAEDAAAAGGAGEAGPGSAGGCAGPTGGSAAPGAAAHGAGAGGS
QPPQRLQQQRGGCPDGSSSTAAPCGPGEDGAGAAVRIGTVRARGSGSAAFTAVLCRALPC
VCPTAWSSCTPVHRPWCCPWSRAVPSAVRSTSTASPSPESPSTLTVMLCPQCSGPGIPQR
PAQAGGTAAAPGGTGRSRAAAAGAAHAGVGTTAAGPGAARGRWRDLHLGTQAESMGTIKR
RCSWLWLGRTGGGWGLWGQLIPVTKPSPLLRPHGADEAVPFALTRDQR
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcttcctgcactcaaggacgctgagcagagtgcgggcccccagctggctccat
gggcatccacgtgcaggggagggcccggtgtggggcagagcggggcttcggggtggggat
ggggtcccccagagcccccccggcgtggccgtcacccggcgcagggcagcacaacggtta
agcgcaggatgcagcggggctgctgaggaagaggaaatctcagcaggaacacggagtggc
caaggccaggggcggccccgcggggccccaccagcagcgggatccgctcattgcaggatc
cggtcactgtggggccgagctgtggggccgggcgcgggcaggagacgtgcgatggaggag
gcaagcggggcgtccccgagggcgcggggtgctgcaggtccccagagctcaatcgttgtc
cccatctctgccaaactgcatccccaattacacaggcacccccctgcaccttccgacccc
cagggccaagccgggcagagcccccgcgccccactgcgccttgcaggtgagcggctggac
gaggacgaggacagggatgaggatgaggacgaggacgaagatgaggacgcagccgcggcg
ggggacgaggagcacatcaccacactgctggcctgcacagacccccacagcactcggcct
ctgccccatagggaccaagaggagcactcggggtgcaccggcagcccccacccccatggg
cagcagcctcgagggctcgatggcgctgggacagaagccccccaccccgacctctttgct
gccctgcagcacgccgtcagctcgctggaacgcgccgtcatctcccggcatcggtgcacg
ccggcaccgccagcagagtgggcacagagcctggaggagctgcagcgcgtggcggggccg
tgccagggcctggggaggggagaggggctgctggaggaggcggagaggaacgcagcgctg
cgggcagcattgggggaccgcgatgaggagctgagccgcaccacggatgcactgcgggcg
ttgcagggggagcgcgagcggctgcaggggaaggtgggtgtggggcggcaccggggggag
ccccacggtttgggccctgggctcagcatggtgctcacacaggtgtgggagctgcaggag
gctctggccaggctggaagggacgggcggtgccgggggtgacaccacggggctcagcggt
gccccgggaccgggggacccccaggacttgtccggctgcatcctgagctgtgacgatgct
cagccccacggcgctcagccccacagcccactctcccccccaccctcagagggtgccagc
cgggagctggagcagaggatgcaacagctacaggggcacatggagaggctgaaggaggtg
aaccagcagctctcggctgccctgcgtgactgcaagagcgattcggagcggctcagcatg
gtgctggggcagcacgagtcccgcagcagcgcgctgcacctggcactgcactgcagtgag
cgctgcgtggacgcctatgctgcgctgctggaacggatgtgggcgaaactgggcagggat
gggcacggccccagtgctggagccacaggggagcagagcacagagcacagctgtggctcc
agccccacacagagactgcagctcccggaccaagcagaaccaaaaagacaggaggggagc
agggtcacctcctgccccgggcttcacagcacccacgggtcagaggagggggccctgcgt
gaggccatccgccagctgcgtgccgagcaggcggccgtgcagatgtccctgcaccacgtc
cccacgcccagccgtgccccgtcccgccgtgctgaggatgcctgtgcccgtgctgagcgc
gcactgcgggatgctcgtgccctcctgcctggctggaggcggccggagagagcggagctg
ctgcgggaggtggcggagctgaaggtgagcgcggcggggtcccccggggaggtgacagca
ggaggtgacggtgacggtgacggcgctgctctgccaggaggccatggccgagctgaggac
gcggctgcagctggcggagcgggagaagcggggcctggaagtgctggcggctgcgcaggg
cccacgggaggcagcgctgcgcctggtgctgcagcacatggagcgggagcagggggctca
cagcccccccagcggctccagcagcagcgaggaggatgccccgatgggagcagcagcacc
gcagcgccctgcggacccggagaggacggcgcaggagctgcagtgcgcattggcacggtg
agggcccgcggctctgggagtgctgcattcactgcagtgctgtgccgggcactgccatgc
gtgtgtcccacagcatggagcagctgcacgcccgtgcacaggccctggtgctgtccctgg
agcagagcagtgccgtcagccgtgcgcagcacgagcactgcatcgccgtcaccagagagt
ccttccacgctcacagtgatgctgtgcccgcagtgctctggccctggcataccgcagcgc
ccggcgcaagcaggcggcacagctgcagcacctggaggcacgggcaggagccgtgcagca
gcagcaggcgcagcgcatgcaggcgttggcacgacggctgcaggccctggagcagcacgc
ggccggtggcgagacctgcatttagggacgcaggctgagtccatggggacaataaagcgc
cgatgctcgtggctctggctcggccgcactgggggtggatgggggctatggggtcagctc
atcccggtaacaaagccgtcccccctcctgcggccccatggcgcagatgaagccgttccg
ttcgccctgacgcgggatcaaaggtga
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