Gallus gallus (chicken): 427421
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Entry
427421 CDS
T01006
Symbol
PDZD2
Name
(RefSeq) PDZ domain-containing protein 2 isoform X2
KO
K24058
PDZ domain-containing protein 2
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gga04990
]
427421 (PDZD2)
Domain-containing proteins not elsewhere classified [BR:
gga04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
427421 (PDZD2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
427421
NCBI-ProteinID:
XP_004937221
CGNC:
53080
LinkDB
All DBs
Position
Z:complement(9453059..9647487)
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AA seq
2683 aa
AA seq
DB search
MRGCPETAMPITQDNAGVFLPLLWQWLQNSRREGAEGAEQKLCHAAVQKLSEYIQLNFSV
DESKLQAGSCGASDTEICTVYLAQEMRKTEVLGLSFGNIPALGDYGEKRRGGKKRKGHKG
PVLDVGCIWVTDLKKNSPAGKCGRVRLKDEILSLNGQLMVGVDVTGASYLAEQCWNGGFV
YLIMLRRIKRKAPLPPSNGNNSNSCDPKAKPSPEPADRAAQNGKRTRKFGVITRTPGSKE
SKEKPEHGNGHCTPMEVEVAQPEAPEAEVNVEEQLHSNRGQHRSRLSEGSVMDIVDQSAQ
REGSRIWKMHILKGTDGLGIQITGGRGSKRSPHSIIVTHVEEGGSAHRDGRLTAGDELLM
INGQSLVGLSHQDAVALLRSAAGMVQLVVASKESAEGDFLKYPSTSLPDLLSTCSVQDSI
SCTDNKENEEPEEEDVKGENVSPETLVAVMETEKSQDAASAEVSKGNNQSPALGSGILKY
RSRSQGAGSRLESVGEDDELMVENGESSYEIAVKYSRGGRKHSLPQQLESAGARQEYHIV
KKSTRSFSAAQVESPWRLTQPSIISNIVLMKGQGKGLGFSIVGGQDSARGRMGIFVKTIF
PNGAAAADGRLKEGDEILEVNGESLQGLTHQEAIQRFKQLKKGVVTLTVRTRLRSPSLTP
CATPTLLSRSSSPSSSASGGTPVPGPDEADGSFSSRKGPGPKDRIVMDVTLNKEPGVGLG
IGACCLTLENSSPGIYIHSLAPGSVAKMDGRLSRGDQILEADSVSLRHAALSEAYAILSE
CGPGPVSLIISRHPNPKVSEQEMDEAIARTTHRESKDTGSSHVSGAVQKTPSPGMKTKQG
ETSSPLSWTMKRFLEPASRGSVSSEAELSQYFSHDGTSHIPFSDAVTGSCDEEQLRQKNR
SGLLDDSSLLPAAREAGLAKANGLSSSTSGRSSCLHNKHVESVRPGILSDSPKSARSPFH
RQRRVVFYDGDASDDDESSHLQRSQRAKSQEDAGIVITTSSVEADDEIQDSNSARHIGTE
TSSPVFSSSVESADSTPEQIDSPFFPIIAFDYSSVPEVRLSSLSLRELREAQLESKRSPR
LEHRAVTRVKSMMSTECRSLQRQRTEEHGSYNKPVARMLPHSKKCEAPDGAGQCQGEIVT
LVRNEHESFGLDLEIQAMPLKVVVTGLRPGGAAERGSMGKMTVGDEITTINSIPVSKMTY
EEICLLMQCLPTSVTLEIQKAASAVSRFTNLILSPAVDTQNQADVSSILSTEEELNAGKQ
EGASLQNAGGSCAGERMTLPPDAVTKDVQRGTTKSSRAEDCMPVTDIDDLLNQMGAPESR
ASRTPSRAESPFRDESTTMCCCGTDEGCPGSEPRQVKEELLEKATNCAANAQGVLGLSVL
DSINTGKLFTVNKNSLNNYSRNFSSLSEDELPAPSCPEGKRSDTFPKSMYGAAEDSHSDA
ESVTETFDSASDVLLGPCAAANAPAVCTVLESDDEQIEICCMNDELQKPSQEQHLTSVTS
SSSLAPPHHYGGKVLQTEDCAMCGSLESSISKLGLEDCSGPGSCPSQCSEVSSASLCTPS
SIFLPEKNIVKNSVDVPEVYTFHNSGALSAEEQVGLGISNGHMKCCESDEEKGSLHCKKI
SFCSARNVSDLENNLPEKEGCHDEQRSKSESETVVDDCNHAVTYCLAKKETNSLSSLSKT
DSNHVNATSARAISLRSPFPSRSKDPKANTTHDLPGKNEKANSVTSGRTSNGKVQSSGTN
HCKEAAVPHSPSSQKKSCQESKGIAQKSIMETLLNNQKAKGGPKLKGFTIKSKVKASSDS
SSVNLTKVSGADQKRTSISPQLSPKLLGKKALLPRNSPTNLDLSKSISTASKTLKSELEN
KPSLVISEDSLLPALNGTSSPTACGGMKCGGCEQLTDLQQAWGKPKEKQASVQPAVCQVR
SVKVDDFRARDSQSKVASSPQGTTKVEYMKGRTENSGVNLNTMKSIYSADDIRQLDLQNV
GASAGGSSSLRSPAVQLEQQEGQEIQRSFIEVKLSSSSSSSSSSSSSSSASSSPAPFLQL
PLLEKNEEVNTEMYQLTEEMGTTEYISKVDIARDRNLCGLSKPVTRTYSMPAQLSGHLRE
NCHAVELHPAQGPQGHAADKTCPQAVTGPLQMVHLSLPNGQSGKEQVYSSKSSQRIHDTS
PSASDVTYPATDKLRSFRRNYYYYELNWPHEPTSSFSVKQRIKSFENLANFDRPIVKAID
IHSATRSQLGRRSCSGMATSSSPADTPRALRRSLSSYGGTPSPADTVAKLPISTEPTHAV
EGVMKEGKPQRSEEGSTGADQPPFPSMVSQVRRSRVLGRLPLSRSRLRELRALSMPDLDK
LCGEGFSGPPQPACFKTELEITPRRSLVLPSQGSPTKAGGTGSGSPRDSSSGTPGSASDD
DAPHGGSPDVEHLGNSWSLSLDQLLISNLDQQKLQSVLSALVPKCDIASMLQEVKAQVKS
KEDAYFVVLSKEEGAGLGFSVAGGIDLEQKSVTVHRVFSKGVASQEGTIQRGDLVLSING
KSLANSVHGDVLNALHQARLHKYAVIVIQKEKDKANNSSRLEISATGRKCVGSGKDVSME
IGTDPNLDMNDVICVELLKTSAGLGFSLDGGKASIAGDRPLLVKRIFKGGAAEQAGNIES
GDEILAVSGKSLLGLMHYDAWNIIKSVPEGPVQLLIRKHRTSV
NT seq
8052 nt
NT seq
+upstream
nt +downstream
nt
atgaggggatgcccggagactgcaatgcccatcacgcaggacaacgcgggggtcttcctg
cccctcctgtggcaatggctgcagaacagccggcgggagggggctgagggggccgagcag
aagctgtgccatgcagctgtccaaaagctgagtgagtacatccagctcaacttctcagtg
gatgagagcaaactgcaggcagggagttgcggggcttcggatacggagatctgcactgtc
tacctggctcaggagatgcgtaaaacagaggtcctgggtctgagctttgggaacatccct
gcactgggggactatggggaaaagcggcgaggaggaaagaagagaaaagggcataagggg
ccggtgcttgacgtagggtgcatctgggtgacagacttgaagaagaacagcccagccggg
aagtgcgggagggtgcggctgaaggacgaaatcctctccctgaacggacagctcatggtt
ggcgtggacgtcactggtgcaagttacctggccgagcagtgctggaatggcggcttcgtc
tacctgatcatgttgcgccgcatcaagcgcaaagctcctcttcctccctccaacggcaac
aacagcaacagctgtgaccccaaagccaagcccagccctgaacctgctgacagagcagct
cagaatgggaagaggaccaggaagtttggagttatcacgaggacaccaggcagcaaggag
agcaaagaaaagccagagcacgggaacgggcactgcactccaatggaggtggaggtggct
cagccggaggcccctgaagcagaagttaatgttgaggagcagctgcacagcaacagggga
cagcaccggtcacggctgtcagagggcagcgtgatggacatcgttgatcaatcagcccag
cgagaaggttcccgcatatggaagatgcacatcctgaaggggacggacgggctgggcatt
cagataacaggaggcagaggctcgaagcgatccccgcacagcatcatcgtcacccacgtg
gaggagggcggctcggcacacagggacggcaggctgacggcaggtgacgagctcctgatg
atcaacgggcagtcactggtggggctgtcccaccaggacgccgtggctctcctgcgctcg
gccgctggcatggtgcagctggtggtcgccagcaaggaatccgctgaaggggattttctg
aagtacccatctaccagtttgccagacttgcttagcacttgctcagtccaagactctatc
tcttgcactgacaataaagaaaatgaagagcccgaagaagaagatgtgaagggagagaat
gtgtctcctgaaacactggtcgctgtgatggaaactgagaagtctcaagatgcagcttct
gcagaagtgtccaaaggaaacaaccagagtccagctctgggaagtggcatactgaaatac
agaagtagatcccaaggtgctggatcacgcttagagtctgtgggagaggatgatgagctg
atggtggaaaatggtgaatccagctatgagatagcagtgaaatactcccggggcggaagg
aagcactccctgccgcagcagctggagtcggcaggagctcgacaggagtaccacattgtg
aagaagtccactcgttccttcagtgctgcccaggtggaatctccatggagattgacccag
ccgtccatcatctctaacattgtcctgatgaaagggcaaggcaagggtctcggattcagc
attgtgggaggtcaggattctgctcgtggacgcatggggatttttgtgaagactatattc
cccaatggtgcagctgctgctgatggaaggcttaaggaaggagatgaaatcctggaagtt
aatggagagtctttacaagggctgacccatcaggaggccatccagaggttcaagcaactc
aagaaaggtgtggtgaccctgacggtgcgcacgcggctgcgcagccccagcctcacaccc
tgtgcaactcccaccctgctgagccgctccagctcacccagctccagtgccagcggtggc
acaccagtgcccggccccgacgaggcagatggttccttctccagccgcaaaggccccggc
ccaaaggacagaattgtcatggatgtgacgctcaataaagagccaggggttggactcggc
attggtgcctgttgtctcacgcttgaaaacagttctccggggatatatatccacagcctg
gccccaggatcagtggctaaaatggatggcagattaagtcggggtgatcagatcctggag
gcagattcggtcagcctgcgtcacgcggcactgagcgaagcctacgccattctgagcgag
tgcggtccagggccagtcagccttatcattagtcggcatcccaacccaaaggtttcagag
caggagatggatgaagcaatcgcacgaactactcaccgagagagtaaggacacgggctcc
tctcatgtctcaggcgctgtgcaaaaaaccccatctcccggtatgaagaccaaacaagga
gagacatcatctcccctcagctggacgatgaaacgcttcctggagccagcaagccggggc
tccgtcagttctgaggcagagctttcccagtacttctcgcatgatggcacgagccacatc
ccattctctgatgctgtaactggctcctgtgatgaagaacagctccgtcagaagaacaga
agcggcttgctggatgacagctctcttcttcctgctgctagagaagcaggattggcaaaa
gcaaatggtctgtcttcttcaaccagtgggagatcatcctgtcttcacaataagcacgtg
gagtctgtccgacctggcatcctcagtgacagccccaaatctgcccgcagcccctttcat
cggcagagaagggttgttttctatgatggtgatgccagtgatgatgatgaaagttcccac
ttgcaaagaagccagagggccaaaagccaggaggatgctggcattgtcattacaacctca
tcagtagaagctgatgatgagatccaggacagcaactcagctagacatattggcacagaa
acatcttcccctgtcttcagcagctccgtggagtctgcagacagcacgccagagcaaata
gactctcctttcttccccatcatagcatttgactactcaagtgtgcctgaagttcgtctc
agcagcctaagtttgagggaactccgggaggcacagctcgaatctaagagatcaccaaga
ctggagcacagggcagtcacaagagtgaaaagcatgatgagcactgagtgccgaagtctt
cagaggcagaggacagaggagcatggctcttacaacaagcctgttgcgaggatgctgcct
cacagcaagaagtgtgaagcacctgatggggctgggcagtgccagggtgaaatcgtcact
ctggttcgcaatgagcacgagtcgttcggcctggatttggaaatccaggctatgccctta
aaggttgttgtcacagggctacgtccaggtggagcagcagaaaggggatcaatgggcaag
atgactgtaggagatgagattaccaccatcaacagtatcccggtcagtaagatgacgtat
gaggaaatctgcttgcttatgcagtgtcttcctacatctgtaaccctggagatccagaaa
gcagcatcggctgtcagcagatttacaaacctcatcctgtctccagcagtagacactcaa
aatcaagctgatgtcagcagcattctctcaactgaggaagaactgaatgctgggaagcaa
gaaggagcaagtttgcaaaatgctggtggcagctgtgcaggagagagaatgacactgcca
cctgatgccgtgaccaaagatgtgcagagaggtaccacaaagagcagccgtgcggaggat
tgcatgcctgtcaccgatattgatgacttgctcaaccaaatgggtgctcctgagagcagg
gcttcgcgcaccccatcgcgagcagagagccccttccgagatgagtccaccacgatgtgc
tgctgtgggactgatgaaggctgccctggttctgagccacgtcaggtgaaggaagagctg
ctggagaaggctacgaattgcgcagcaaatgcacaaggggttttggggctgtctgtgttg
gactctattaacacaggcaaactttttactgtgaataaaaactctttaaataactattct
aggaattttagcagtttaagtgaggatgagttgcctgcaccgagctgtccagagggtaag
agaagtgacacgtttcctaagtctatgtatggggctgcagaagattctcactcagatgca
gagtctgtcacagaaacatttgatagtgccagtgatgtgctgcttgggccctgtgctgct
gctaatgccccagcagtctgtactgtattggagtcagatgatgagcaaattgagatttgt
tgcatgaacgatgagctgcaaaagccttctcaggagcagcatctcacatctgtgacaagc
tcatcctctctggcaccaccacatcactatggtggcaaagttttgcaaactgaggactgt
gcaatgtgtgggtcactggagtcaagcatcagcaaactgggcttggaagattgcagtggt
cccggttcgtgtccctcccagtgttcagaagtctcctctgcttccctgtgtactccttcc
tcaatctttctgccagaaaaaaacatcgtaaagaattcagttgatgtccctgaagtttac
acgttccataacagtggtgccttaagtgcagaagaacaagtgggtctggggatcagtaat
ggacacatgaaatgctgtgaatctgatgaagagaaagggtctctgcactgcaaaaagata
agcttttgctctgctagaaatgtcagtgacttggagaacaacttgcctgagaaagaagga
tgtcatgacgaacagagatccaaatctgaaagtgaaacagtggtagatgactgtaatcat
gctgttacctattgcttagcaaagaaagaaaccaacagtttgtccagcttgtctaaaaca
gacagtaatcatgtgaatgcaacatcagcaagagcaatatcactcaggtctccctttccc
tccagatctaaagatccaaaggctaatacaactcatgacttgccagggaaaaatgagaaa
gctaactctgtgacttcaggaaggacttcaaatggaaaagtccaaagctcgggcacaaat
cactgcaaagaagccgcagtaccgcacagcccatcttcacagaaaaaatcttgtcaggag
tctaagggaatagcacaaaaaagtataatggaaacccttttaaataaccagaaggccaaa
ggaggaccaaagctaaaaggtttcactatcaaaagcaaagtaaaggcaagttcagattct
tccagtgttaatcttaccaaagtcagtggggcagatcagaaaaggacttctatttctcca
cagctgtctcctaaacttttggggaagaaagcactgttgccccgtaactcacctacaaat
ctagatctgagcaaaagcatttcaacagcctcaaagactctgaaatccgagctggaaaat
aaaccatctctggtcatttctgaagattcacttctgcctgccctgaacggcaccagcagc
ccaacagcatgtggtggaatgaaatgtggtggctgtgagcagctaacagatctgcagcag
gcttggggaaagccaaaagaaaagcaagcttccgtgcagcctgcagtgtgtcaggttagg
agtgttaaggtggatgatttcagagcaagagacagtcaatccaaagttgcttcatcccct
caagggacaacaaaagttgaatatatgaaaggtagaactgagaattctggagtgaacctg
aacacaatgaagagcatctatagtgcagatgacattaggcagttagatttgcaaaatgtt
ggagcatctgctggaggttcttcttcattgaggtctcctgcagttcagctggagcagcaa
gaagggcaggaaattcagcgcagtttcattgaggtgaagctttcctcctcctcctcttcc
tcctcctcctcctcttcctcatcttctgcctcttcctcaccagcgccatttttgcagctg
ccattgctggagaaaaatgaagaggtgaacacagagatgtatcaactgactgaagagatg
gggaccacagagtatatctcaaaagtggatattgccagagacagaaatctctgtggcttg
tcaaaacctgtgacaaggacgtactcgatgccagcccagttatcaggtcacttgagggag
aactgccacgctgtggagcttcatcctgcacaaggtccccagggccatgctgcagacaaa
acatgtccccaggcagtgacgggtccgttacagatggtgcatctcagcctgccaaatggc
cagagtgggaaggagcaggtatacagctccaaaagctcccagaggattcatgacacatcc
ccctccgccagcgacgttacttaccctgccactgacaaactgaggagtttcaggaggaat
tactactactacgagctgaactggccacacgaacctacctcatccttttctgtcaaacaa
aggatcaaatcctttgaaaacctggctaattttgaccgacccatcgtgaaggccatcgat
atccactcggccacgcggtcccaacttggcaggaggtcgtgcagtgggatggccacttca
tccagccccgctgacacaccacgggctctgcggcgcagcttgagctcctatggtggcaca
ccaagcccagccgacaccgtggccaagttgcccataagcacagagccaacacatgcagtg
gagggtgtcatgaaggaaggaaagccccagaggagtgaggagggcagcactggggcagat
cagcccccttttccttccatggtctcgcaggtgcggcgcagccgagttctgggccggctg
cctctgtcccgctccaggctgcgggagctgcgggcgctcagcatgcctgacctggacaag
ctatgtggtgagggcttctcagggccgccccagcccgcctgtttcaaaacagagctggaa
atcactccccggagatcccttgtcttgccaagccaaggcagccctacgaaggcagggggg
actggcagtggcagccctcgggacagcagttcggggacaccggggtcggcctcggatgac
gacgcaccccatggtggctctccagatgtggagcatctgggaaacagctggtccctcagt
ctggatcagctgctcatctcaaacctggaccagcaaaaattgcagtctgttttgtcagct
ctggtaccaaaatgtgacattgcttctatgctccaagaagtcaaagcacaagtgaagagc
aaagaagatgcatactttgtagtcctgagcaaagaagaaggagctggcctgggatttagt
gttgctggaggaatagatctggaacagaaatcagtcacagtccacagagtgttttccaag
ggagtggcatcccaagaagggactatccagcgaggagatcttgttctgtcaatcaatggc
aagtctcttgcaaactcggtccatggcgatgtcctgaatgcactccatcaggcgagactg
cacaagtatgcggtcattgtcatccagaaggaaaaagacaaagcaaacaattcctccaga
cttgagatatcagctactggcagaaaatgtgtggggtctggaaaggatgtttccatggaa
ataggaacagatccaaacctggacatgaatgatgtcatctgtgttgaattattgaaaacc
tctgctggcttgggcttcagcctcgacggtggaaaagcttctattgctggagacaggccc
ttgcttgtaaaaagaatatttaaaggtggtgccgcagagcaagctggaaacatagaatct
ggagatgagattcttgctgttagtggaaaatcattacttggcctcatgcattacgacgcc
tggaacattattaaatctgtgccggagggccctgttcagctactcatcaggaaacacaga
acttcagtatga
DBGET
integrated database retrieval system
