Gallus gallus (chicken): 427995
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Entry
427995 CDS
T01006
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
gga
Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gga04990
]
427995 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
gga04990
]
Other domain-containing proteins
Patched domain-containing proteins
427995 (PTCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
427995
NCBI-ProteinID:
XP_425565
CGNC:
12240
Ensembl:
ENSGALG00000016358
LinkDB
All DBs
Position
1:complement(119857155..119891981)
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AA seq
914 aa
AA seq
DB search
MVLRGPWGSRGGPGAALALLRAIRTRMLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVL
ISILLGASFSRYQVEESVEHLLAPTHSLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYG
RVIITSFRKANMLDQHHTDLILKLHSAVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIV
HVLEELKAARSSNRTNFAITYPITHLKDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYY
LQAINSLNDMVAEKWESIFCDTVELFQKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLIT
SLVLVVTLAILCCSMQDCVRSKPWLGLLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPF
VMLGHGLYGTFEMLSSWRKTREDQHVKERTAAVFADSMLSFSLTTAMYLVTFGIGASPFT
NIEAARIFCCNSCIAIFFNYLYVLSFYGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKP
AWYRFLLTARFSEDTTDSEETNTYESHLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISF
ALMGYLQVSEGSDLSNIVATATRTIEYTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQED
VLEYTKGFVRISWFESYLNYLRKLNISTGLPKKNFTDMLRNSFLKAPQFAHFSEDIIFSK
KYNNEVDVVASRMFLVAKTMETKREELYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYAS
SVGAPLQNSCISALFLLFFSAFLVADSLINVWLTLTVASVEFGVIGFMTLWKVELDCISV
LCLIYGINYTIDNCAPLLSTFVLGKEFTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAA
VPSNLTRTLFRCLFLIALVTFFHCFAILPVILTFLPPSKKKRKEKKNPENREEIECVEMV
DMDSTRVVDQITTV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgcgggggccgtgggggagccgcgggggccccggcgcggcgctcgccctcctg
cgcgccatccgcactaggatgttgcggcaggtcttgcacagggggctggggacgtccttc
tcccggctcggccacttcgtcgccagccacccggtgttcttcgcttcggcgcccgtgctc
atctccatcctgctgggcgccagcttcagccgctaccaggtggaggagagcgtggagcac
ctcctggcccccacccacagcctggccaagatcgagcggaacctggtggacagcctcttc
ccggtgaaccgctccaagcaccggctctactccgacctgcagacgccggggcgctacggc
cgggtgatcatcacctccttccgcaaggccaacatgctggaccagcaccacaccgatctc
atcctcaagttgcactctgctgtgaccaggatccaagtgcaaagacctggtttcaattac
acgtttgcccatatatgtatcctgaacaatgacaagacatgcatagtggacgacatagtg
catgtgctggaggaattaaaggctgctcgttcttctaatcgaactaattttgcaatcact
tatccgattactcacttaaaggatggcagggaagtgtataacgggcatcagcttggtggg
gttactgtgcacagcaaagaccgggtgaagtctgcagaagccattcagctcacctactac
ttgcaggcaatcaactccttgaatgacatggtggcagaaaagtgggaatccattttttgt
gacactgttgaacttttccagaaatccaacaggaaagtcaaaatgtatcctttcacttct
tcttcgctgaaggaggatttccagaagacgagcagggtgtcagaacgctacctgatcaca
agcttggtccttgtggtcaccttggccattctctgctgctccatgcaggattgtgtccgc
agcaaaccctggcttggcctgctgggattgctgaccgtgacccttgccaccctgactgca
gccgggatcatcaatctcactggtgggaaatacaattccaccttcctggggatccccttc
gtcatgttaggtcatgggttatatgggacttttgaaatgttgtcctcctggagaaaaact
agagaagaccaacatgttaaagagaggactgcagccgtatttgcagactccatgctctcg
ttttccctcaccactgccatgtacctggtcacttttggaataggtgccagtcccttcact
aacattgaagcagccaggattttctgctgcaattcctgtattgcaattttcttcaactac
ctctatgtactctccttttatggttccagcctggtgtttactggctacatagaaaacaac
taccagcatagtatcttctgtagaaaggtaccaaagccagaggtattgcaagagaagcct
gcatggtataggtttcttctgacagccagattcagcgaggacacaacggattcagaggaa
acgaacacttacgagagtcatcttttggtgtggttccttaaacgctattattgtgactgg
ataacaaacacttacgtcaagccttttgtagttctcttttaccttgtttatatttccttt
gccttaatgggctacctgcaggtcagtgaagggtcagacctgagcaacatcgtagcgacc
gccacacggaccattgagtatacaactgcccagcagaagtatttcagtaactacagcccg
gtgattgggttctacatctacgagtcaatagagtactggaacaccagtgtccaggaggat
gtgctggagtacaccaagggctttgtgaggatatcttggtttgagagctacttaaattac
cttaggaaactcaacatatctactggattgcccaagaaaaatttcactgatatgttgagg
aactccttcttgaaagcccctcagtttgcccatttttcagaggatatcatcttttccaag
aaatacaacaatgaggttgatgtcgtggcctccagaatgttcctggtggccaagacaatg
gaaaccaagagggaagaactttatgacctcctggaaaccctgaggaagctttctctcacc
tccaaggtgaaattcatcgttttcaatccatcatttgtgtacatggatcgttatgcctct
tcagtgggagcccccttacaaaactcctgcattagtgctttatttctgctcttcttctct
gcattcctggtggcagactctctgatcaatgtatggctcactctaactgttgcctcggtt
gagttcggagttataggttttatgaccttgtggaaagtggaactagattgtatttctgtg
ttgtgcttgatttacggaattaattatacgattgacaactgtgctccactgttatcaacc
tttgtcctgggcaaagagttcacaagaactaaatgggtgaaaaatgccctggaagtgcat
ggggtagctattttgcagagctacctctgctatattgttggtctgattcctcttgcagct
gtgccttcaaatctgacccgtacactgttcaggtgcttgtttttaatagcattagtcacc
ttctttcactgctttgccattttacctgtgatattgacttttctgccaccgtccaagaag
aagaggaaagagaagaagaatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtg
gatatggatagcactcgagtggttgaccaaattacaacagtctaa
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