Gallus gallus (chicken): 428063
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Entry
428063 CDS
T01006
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
428063 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gga01009
]
428063 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
428063 (PCDH20)
Protein phosphatases and associated proteins [BR:
gga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
428063 (PCDH20)
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Protocadherins
428063 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
SGBP_BT4661-like
Motif
Other DBs
NCBI-GeneID:
428063
NCBI-ProteinID:
XP_004938713
CGNC:
12713
Ensembl:
ENSGALG00000016934
UniProt:
A0A8V0X0T3
LinkDB
All DBs
Position
1:163198027..163204708
Genome browser
AA seq
917 aa
AA seq
DB search
MGSPGGCSSPSARGSLQHLLLFLLFVGPFNCFASYSRATELFYSLNEGLPAGVLIGSLAR
DLRLPTAGGQRPAAPQPPLSFTLASRGLGGQYVHLDNRSGELHTSALEIDREALCMESGG
STVPGEGDTVSLSSSSSSPDSCLLLLDVLVLPQEYFRLVKVKIAIRDVNDNAPRFPVPHI
HLSVPENAPVNTRLAIEHPALDPDVGTNGVQTYRLRDNYGVFTLDVEENESGERTPYLIV
MGALDRETREEYVTVIIAEDGGTPPLVGSATLTIGISDINDNCPQFSDTQLNITLYGNSS
LGTHVATVHAVDLDLGSNAQITYSYSQKVPQPSRDLFHLDESTGVITLSSKVDGNTPRLH
RLIILGNGPGCIPAVITVLVTIIKVMMRPPEVVPRFIANEMEGVVYLKELEPINTPIAFF
TIKDPDEKYKVNCYLDGDGPFRLSPYKPYNNEYLLETTKPLDYETQQLYEISVVAWNSEG
FNVNKVIKIQVLDDNDNSPIFSQQLIELSIEENNVPNAFLTKLHATDADSGERGEVSYFL
GPDAPSYFSLDKTTGVLTVATQLDREEKEKYRYTVKAVDSGFPPRESIATVTITVLDKND
NSPRFINKDFSFFVPENFPGFGEIGVISVTDADAGQNGWVALSVLNGSDIFVIDTGKGVL
RAKVSLDREQQSSYVLWIEAVDGGDPALSSTAKITILLLDINDNPPLVLFPQSNMSYLLV
LPSTLPGSPITEVYAVDKDTGMNAVIAYSIIGRRGPRPESFRIDPKTGNITLEESLMQND
YGLYRLLVKVSDHGYPEPLHSTVMVNLFVNDTVSNESYIESLLRKEPDINIEEKQPQISV
EPTHKKMESASCMPTLVALSIISLGSITLVTGMGIYICLRKGKKHHRADENLEVQIPLNG
RINLHMLEKKPVEISNI
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggggtccccgggcggttgcagcagccccagcgcccgcggcagcctgcagcacttgctc
ctcttcctgctcttcgttggacctttcaactgctttgccagttacagccgtgccaccgaa
ctcttctacagcctcaatgaggggctgcctgccggtgtgctcattggcagcctagcccgt
gacctgcggctgcccacagctggggggcagcgccctgcagctccccagcctcccctctcc
ttcaccctggcttctcgtggcttgggaggacagtatgtgcatctggacaaccgctctgga
gagctacatacttcagctttggagattgaccgagaggctctgtgcatggagagcggtgga
tccactgtccctggagagggagatactgtatccttgtcttcctcctcatcctcacctgac
tcatgcctccttctgctggatgtgctggtactgccacaggagtacttccgcctggtgaag
gtgaaaattgctatccgtgatgtcaatgacaatgctccccgcttccctgtgccccacatc
cacctctcagtacctgagaatgcacctgtgaacacccgtctggctattgagcaccctgct
cttgaccctgatgtgggcaccaatggtgtccagacctaccgtctacgagataactatggt
gtgttcaccctggatgtggaggagaatgaaagtggagagcgaaccccctacctgattgtc
atgggggctctggacagggagacaagggaggagtatgtcacagtcatcattgctgaggat
gggggcactcctcctcttgtgggtagtgctacccttactattggcatcagcgacatcaat
gacaactgcccccaattcagtgacacacagctcaacatcactctttatgggaattccagc
ctgggaacacacgtggccactgtccatgcagtagacctggaccttggatccaatgcacaa
atcacctattcctacagccagaaggtccctcagccatccagagatttgttccatctggat
gaaagcacaggagtcatcacactatccagtaaggttgatgggaacactccaaggcttcac
aggctgatcatactgggcaatggtcctggttgtatccctgctgttatcacagtgctagtg
accatcatcaaagtcatgatgaggccacctgaagttgtccctcgtttcatagctaatgaa
atggaaggagtggtatacttaaaggaactggagcctatcaacacaccaatagcatttttt
accatcaaagaccctgatgaaaaatataaagtcaattgctatttggatggtgatgggcct
ttcaggctttcaccgtacaagccatacaacaatgaatacctgttggagaccacaaaacct
ttagactatgagacacagcagctatatgaaatctctgtagttgcatggaactctgaagga
tttaatgtaaacaaagtaataaaaatacaagttttggatgacaatgacaactcaccaatt
ttctctcaacagctgatagaattatcaattgaggaaaataacgttcccaacgctttcttg
accaaactgcatgctacagatgctgacagtggagaaagaggggaagtgtcctatttttta
gggcctgatgccccttcctatttttctttagataaaaccacaggagttcttacagttgcc
actcagctggatagagaagaaaaagagaaatacagatatactgtgaaagcagtagattct
ggattccctccaagagaatcaatagcaactgtcaccatcaccgtactggataaaaatgat
aatagtccaagatttatcaataaggatttcagcttttttgtgccagaaaactttccaggt
tttggtgaaattggagttatcagtgtcacagatgctgatgcaggacaaaatggatgggtt
gctctttcagttctgaatggaagtgatatttttgtcatagatactggaaaaggagttttg
agagctaaagtctctctcgatagggagcagcaaagctcctatgttctgtggattgaagca
gttgatggtggtgatcctgctttgtcttctactgcaaaaataacaatccttcttctagac
ataaatgacaacccgcccttggtcttgtttcctcagtccaatatgtcttatttgttggtt
cttccttctacccttcctggctctcctatcactgaggtctatgctgttgacaaggacact
ggcatgaatgcagtcatagcatacagcatcataggaagaagaggcccccgaccagagtca
tttaggattgaccctaaaactggtaatatcaccttggaagagtcactcatgcaaaatgac
tatggtctgtatcggctacttgtaaaagttagtgatcatggttatccagaaccgctccat
tccactgtcatggtgaatctttttgtcaatgacactgttagcaatgagagctacattgaa
agtttgttaagaaaggagcctgatatcaatatagaagagaagcagccacaaatatccgta
gaacctacacataaaaaaatggagtcagcatcctgcatgcctaccttagtagctctgtca
ataataagcttgggttcaatcactttagtaactgggatgggcatttacatctgtctaaga
aaagggaaaaaacaccacagagcagatgagaacttggaagtacaaatcccattaaatgga
agaattaacctgcacatgttggagaagaaaccagtggagatttctaacatttga
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