Gallus gallus (chicken): 428216
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Entry
428216 CDS
T01006
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03013
Nucleocytoplasmic transport
gga03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
428216 (SRRM1)
03015 mRNA surveillance pathway
428216 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
428216 (SRRM1)
03041 Spliceosome [BR:
gga03041
]
428216 (SRRM1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
428216 (SRRM1)
Spliceosome [BR:
gga03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
428216 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
428216
NCBI-ProteinID:
NP_001026665
CGNC:
876
Ensembl:
ENSGALG00000001283
UniProt:
Q5ZMJ9
E1BQL2
LinkDB
All DBs
Position
23:complement(2679450..2696265)
Genome browser
AA seq
888 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPIRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKSEPPVPETKEISPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS
SRSRSPPKKPPKRTVSSPPRKTRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQQSNRA
RKSRGSVSPGRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKEPSPRRR
RRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPS
PPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRKGSPPS
RSNRETRSPPQNKRDSPSPRPRASHTSSSPPPLRRGASASPQRRQSPSPSTRPIRRVSRT
PEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPAKKAKS
PTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAVAAAPAAVAAADTT
SAQEEQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagagcaggacaatcgcttcagcaataag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
gggtttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggcgaactatggccactgctgttaagtgcacaagaaaacattgctggtattcca
actgcttttctggaactgaagaaagaagagattaaacagcggcagatagagcaagagaag
ctggcttctatgaagaaacaagatgaagacaaggagaagagggataaggaagacaaagac
aacagagaaaaaagagacagatccaggagtccaagaaggcgcaaatcgaggtctccttcc
cccaggaggagatcctcacccatcagacgggagcggaagcgcagccattctcgctcccct
catcacagaaccaagagccgcagtgctacgcctgcaccagaaaagaaggaggcaactcct
gagccagaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcgaacagt
gatatcccaaaagctcctaaatctgaacctcctgtaccagagacaaaagaaatttcacca
gaacgtaattcaaagaaggagagagagaaggagaaagagaagactcgtcaaagatcccca
actcgctctaagtcaaggtcaaggtctcgatcacgttctccctctcattctcgaccaaga
aggcgtcacagatcacggtcaagaaggcgacccagcccgagacgacggccgtctccgagg
aggaggactcctccaaggcgaatgcctcccccacccaggcacagaagaagcagatcgccg
gtgaggcggagaagacggtcatcagcgtctttatctggcagtagctcttcctcctcctcc
tcacgttcccgatctccaccaaagaaaccacctaaaagaactgtatccagtcctcctcgt
aaaacacgtaggctgtctccttctgccagccccccgaggcgaaggcacagaccatcccca
ccagcaagtccacctcccaaaccacgcagatctccaacgcctcagcagtcaaatcgtgca
aggaaaagccgtggctctgtttcacctggcagggcatcagcacccaagcataagagtact
gaaaaaagagaatctccttcaccagcaccaaaaccaaggaaagctgagctgtctgagtca
gaagaagataagggaggtaaaatggctgcagcagattctgtgcaacagaggcgtcagtac
agaaggcaaaatcaacagtcttcatctgattctggctcctcatcttcatctgaagaggaa
agaccgaagagatccaatgtgaagaatggggaggtcggccgccgccgccgccattcccat
tcccgcagtccatcaccatccccacggaaacgacagaaggagccttcccctcgtaggagg
aggaggagcccatcccccccacctgcccgccgacggcgctctccttccccacccccccct
cccaggcgacgccgctcaccctcattgccccgccgaaggtctccttcaccgcccccacgc
agacgctcaccttctccacggaggtactcccctccgatacaaaggcgatattctccttct
ccacctccaaagagaagaacggcttctcctcctcctccacccaaacgacgagcatcgcct
tctccgcagtcaaaacgcagagtctcccattcaccaccaccaaaacaaaggagctctcca
gctgctaaaaggcgctcaccatcgatatcttccaagcaccggaagggttctcctcccagt
aggtccaatcgggaaacacgttctccaccacaaaacaaaagggattcaccttcaccacgg
cctagagcttctcatacctcttcaagcccaccaccactgcgcaggggagcgtcagcatcg
ccccagagaagacagtctccatctccaagcactagacccatcaggagggtgtcgagaaca
ccagaaccgaagaagacaaaggcttccaccccaagtccacgatctgccagacgggtgtct
tcatcacggtctgcatcgggatcacctgagccagctccaaaaaagcaccaagggcctcca
tctcctgctcggtctcgttccccttctgctaattggtcacctgcaaaaaaggctaaaagt
ccaactcagagcccatcgcctgcaaggaattcagatcaagaagggggtggaaaaaagaag
aagaaaaagaaggataagaagcataaaaaggataaaaagcacaagaaacacaaaaagcat
aagaaggaaaaggctgcagtggctgcagctcctgctgctgtggctgcagcagataccacc
tcagcacaggaagagcaggaagcagagacagaacccaaaaaggagacagaaagtgaacca
gaggacaacctcgatgatctagaaaagcacctgcgagagaaggcgctgaggtcgatgagg
aaggcacaggtgtccccaccatcttag
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