KEGG   Gallus gallus (chicken): 428354
Entry
428354            CDS       T01006                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gga03036]
    428354 (KDM4B)
Enzymes [BR:gga01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     428354 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     428354 (KDM4B)
Chromosome and associated proteins [BR:gga03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    428354 (KDM4B)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C
Other DBs
NCBI-GeneID: 428354
NCBI-ProteinID: XP_015155665
CGNC: 3001
Ensembl: ENSGALG00000034592
LinkDB
Position
28:complement(4850881..4929040)
AA seq 1182 aa
MGSENPSPQNPGCKIMTFRPTLEEFREFGKYVAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMIIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDTDVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKVRWCAVCEVLVMIPC
RTRTLLGKGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYH
AGFNHGFNCAESTNFATLRWIDYGKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGK
DIAVLDHMKPTALTSPELDAWNETKADLKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTE
DQKSLGDVMAIETALEDVKVKEELKRGPDLEEEERSKVIEGEGDSKVKARPPKVKGERKK
KHLFHQHQHHLQTSQPLQQQQQQPPLPLAAQQQQAEEEAAAAARSPVPTAAPAASTADKS
LLTTSLNVVQPSEAPVEEDDFKPRPIIPMLYVVPRTKKVVFDKEHMSCQQAFEQFATQKS
PGWREQTVPLEIPVKEEESAESENTEIATETAAFSKMKMEIKKSRRHPLGKPPTRSPLSV
VKQETSSDEETFPFSGEEDMSDPEALKSLLSLQWKNRAPNFPAERKFNAAAALSEPYCAV
CTLFYPYTQSLQMDKEAVPASVGETTSFVHLSKCGQKTKPLIPEMCFTSSGENTEPLPSN
SYIGEDGTSSLISCAKCCLQVHASCYGIRPDLVNESWSCSRCSANAWAAECCLCNLRGGA
LQMTTDGRKHLVSFRIRCLRRLSPVVPETFTLATMINKLVGNVAKSANHHHKHALILWVH
IICAIAVPEARFLNVIERHPVDITAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTS
FHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANQNIQFRREVTLGQTVITKNRNGLYYRC
KVIGMTTQTFYEVNFDDGSYSDNVYPESIISRDCIQLGPPPEGEMVQLQWTDGIIYKAKF
IAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEMRA
AKRPRLGNARNPEEYGQNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3549 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccgcagaaccctggctgtaagattatgacctttcgtccc
actctcgaggagtttcgggagttcgggaaatacgttgcttacattgaatcacaaggagct
caccgagcagggcttgccaaggtgattcctcccaaggagtggaagccccgaaaaacctat
gatgacatagatgatatgattatcccagctcccattcagcaggtggttactggccagtca
ggattattcactcagtacaatatacagaagaaacccatgactgtgggagagtaccggcgt
ctggctaatagcgagaagtattgtacgccacgccatcaagattttgaagacttggagcgc
aagtactggaagaacctcacttttgtctcgcctatttatggggctgatatcagtggctct
ctatatgacacagatgtggaagaatggaatattggtaatctgaacaccctgttagacatg
gtggaacatgagtgtggtattattatagaaggtgtaaacactccctacctctactttggg
atgtggaagacaacgtttgcttggcatacagaggacatggatctctacagtatcaactac
ttgcattttggggagcccaaatcctggtatgccatacctccagaacatggcaagagattg
gaacgcttggcgaaagttcggtggtgtgcagtctgtgaagtgttggtgatgattccatgc
cgtacacgcactctgctgggaaaaggattttttcctggaagctctcagggatgtgatgct
ttcctccgtcacaagatgaccctcatttcaccctcaatcttgaagaagtacggtattcct
tttgaccggatcacccaggaagctggagagtttatgattacatttccttatggttaccat
gctggcttcaatcatggcttcaactgtgctgagtcaaccaactttgccacgttgcgttgg
attgattatggaaaaatggcaacccaatgtacgtgccgcaaagacatggtgaagatttcc
atggatgtctttgtgagggttctgcagccagaacgttacgatttatggaaacaaggaaaa
gacattgctgtcctggaccatatgaaacccacagctctgactagcccagaactagatgcc
tggaatgagacgaaggcagacttgaaggccaaattgcttcgcaggataggagatgaggaa
gaggacaacaaacaccggtctcacagaaaaagaagtcaacccagaagacataaaacagag
gatcagaagtctctgggggatgtcatggctattgaaactgccttggaagatgtgaaagtg
aaagaggaactgaaaagagggccagacctagaggaagaggagagaagcaaagtgattgag
ggagaaggtgacagcaaagtaaaggctcgtcctccaaaagtaaaaggtgaaaggaagaag
aagcatcttttccatcagcaccagcaccacctgcaaacatctcagcctctgcagcagcag
cagcaacagccaccactgccactggcagcgcagcagcagcaggcagaggaagaggcagca
gcagcagcacggtcgccagtacccacagcagcacctgcagcatccacagcagacaagagc
ttgctgaccacttccctcaacgttgtccagccctcggaggcaccagttgaggaagatgac
tttaagcctcggcctatcattcccatgctttatgtggttccacggaccaaaaaagtggtg
tttgacaaagagcacatgtcctgccagcaggcatttgagcagtttgcgactcagaagagt
cctggttggcgggagcagacagtccctttggaaatccctgtgaaagaagaggagagtgca
gaatcagaaaatacagagattgctacagagactgctgctttttcaaaaatgaagatggag
ataaagaaaagtcgtcgtcacccattaggcaaaccaccaacccgctccccattgtcagtg
gttaaacaggagacctcgagtgatgaggaaacgtttccattttctggggaggaagatatg
agtgacccagaggctttgaaatctttactttccctccagtggaagaatagagcacctaat
ttcccagctgaaaggaaattcaatgcagctgctgccctgagtgagccatactgtgctgtc
tgtaccctcttttacccatatacccagtccttacagatggataaagaagctgtcccagcc
tctgtaggggagaccacctcttttgttcacctttctaagtgcggacagaagacaaagcct
ctgatcccagagatgtgctttacctcaagtggagaaaacacagagccccttccttcaaat
tcatatattggagaagatggaaccagttccttgatatcctgtgccaaatgctgcctgcag
gttcatgctagctgttatggaatacgtccagatttggtgaatgaaagctggtcttgctca
cgatgctcagccaatgcatgggcagcggaatgctgcctgtgtaatctcaggggaggagct
cttcagatgaccactgatgggcgaaaacatttagtatcattcaggatcagatgcctaaga
agactgagcccagttgttccagagacctttaccttggcaacaatgattaacaaattagtt
ggtaatgttgccaagtctgccaaccaccaccataaacatgccttgatactgtgggtccat
ataatttgtgctatcgctgtccctgaggcccgttttctcaatgtaatagagcgtcatcct
gtggatatcactgctattccagagcaaaggtggaaactgaaatgtgtgtactgtcgaaag
cggatgaagaaagtgtctggtgcctgcatccagtgctcctacgagcactgctccacttcc
ttccacgtgacctgcgcacacgctgctggtgtgcccatggagcccgatgactggccctac
gttgtgtccattacctgcttcaaacacaaagcagccaaccagaatattcagtttcgaagg
gaggtgacccttggacagactgtgatcacaaagaaccggaatggactctactacagatgt
aaagtcattggcatgacaacacagactttctatgaagtaaactttgatgatggttcatac
agtgacaacgtttacccagaaagcattattagcagagactgcatccagctgggaccccct
ccagagggtgagatggttcaactgcagtggacagatggaatcatctataaggccaagttt
attgcagctcagatcagtcagatttatcaggttgagtttgaagatggctcgcaactaatg
gtaaagcgtggtgatatttataccttggaggaggagcttccgaagagagtgaagtctcgc
ttgtccctcagcactggggcccctcaggaagatgtattttcgggagatgaaatgagagca
gccaagcgtccccggctggggaatgcaaggaatcctgaagagtatggacaaaacccagat
tacttggcctttatggagagcctgttgcagacacagtaccaacctggaactcagagcaac
atgttttaa

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