Gallus gallus (chicken): 428768 Help Entry 428768            CDS       T01006                                  Symbol SYNPO2 Name (RefSeq) synaptopodin-2   KO K24066   synaptopodin-2 Organism gga  Gallus gallus (chicken) Pathway gga04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gga00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     428768 (SYNPO2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:gga04990]     428768 (SYNPO2) Domain-containing proteins not elsewhere classified [BR:gga04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    428768 (SYNPO2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 PDZ_2 Pept_S41_N_bact Motif Other DBs NCBI-GeneID:  428768 NCBI-ProteinID:  XP_004941287 CGNC:  9089 Ensembl:  ENSGALG00000011994 LinkDB All DBs Position 4:complement(54812245..54904004) Genome browser AA seq 1272 aa AA seqDB search MLPNCTRKMGTGDYICIAMSGGAPWGFRLQGGKEQKQPLQIAKVRNKSKAAKAGLCEGDE VVSINGKPCGDLTYAEVIVLMESLTDVLQMLIKRSSSGINETFSAEKENGKHDNIKNEDY RESTTLQINTAKEIPHGDLCITEIYSETHQGAGESNMHFSEKKQETTQSHRITPKVIGTS KALVTDESAFRGKTEERRPSKMVELQLSLSNDGHKSTNAPAVTLIGAEKCTPSGRGPSVQ EDGTSPVIAIPLSVKEGNIQWSSKVVQFSSSKEVKRIQSAAPSIPRVEVILACSDREKEG PTSLAERGCVDSQVEGGQSEAPPSLPSFAISSEGTEQGEDNQHSERDHRPLKHRARHARL RRSESLSEKQVKEAKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELE RDEDEGEEGEVEEGDKENTFEVSLLATSESEIDEDFFSDIDNDKKIVTFDWDSGLLEVEK KTKSGDEMQTLPETTGKGALMFARRRQRMDQITAEQEEMKARTMHAEEQREVTVSENFQK VSSSAYQTKEEETLRQQPCISKSYADVSQNDGKTVQQNGFGLAPDTNLSFQSSEAQKAAS LNRTAKPFPFGVQNRAAAPFSPTRNVTSPLSDLPAPPPYCSISPPPEALYRPLSAPAASK AAPILWSHTEPTERIASRDERIAVPAKRTGILQEAKRRSTSKPMFSFKEAPKVSPNPALL SLVHNAEGKKGSGAGFESGPEEDYLSLGAEACNFMQSQASKQKAPPPIAPKPSLKVSPAA GTPVSPVWSPAVASNKAPSFPAPASPQAAYPAAPKSPQYPHSPSANPPNTLNLSGPFKGP QATLASPNHPAKTPTTPSAGETKPPFEMPPDMRGKGAQLFARRHSRMEKYVVDSETVQAN MARASSPTPSLPASWKYSSNVRAPPPVAYNPIHSPSYPPAATKPFPKSTAATKNTKRKPK KGLNALDIMKHQPYQLDASLFTFQPPSNKESLATKQIPKLPTSKQAMSFRLPGSGSPTNA RASSVYSVPAYSSQPSFQSNASTPVNESYTPTGYSAFSKPESTTSSLFTAPRPKFSAKKA GVIAQERSSGRSLSLPGKPSFISRATSPTSPLIFQPAPDYFSKPDTAADKPGKRLTPWEA AAKSPLGLVDEAFGPQNMQESIAANVVSAAHRKMLPEPPDEWKKKVSYDPPGPSASLALL GGKQPGVTAARKSSLSVSNATTQAGSQQQYAYCSQRSQTDPDIMSMDSRSDYGLSTADSN YNPQPKGWRRPT NT seq 3819 nt NT seq  +upstreamnt  +downstreamnt atgctgcctaattgcaccaggaaaatgggcacgggggattatatctgcattgctatgagt ggaggggcgccttggggctttagattgcaaggtggcaaggagcaaaagcagcctttgcaa atcgccaaggttcgcaacaaaagcaaagcagctaaggctggcctgtgtgagggggatgaa gtggtgtctatcaatggcaaaccctgtggagacttgacctatgctgaagttatcgttctg atggagagcttgactgatgtcctgcagatgcttatcaagagatcctccagtggaataaat gaaactttcagcgctgaaaaagaaaatggaaagcatgataacataaaaaatgaggactat agggagagcactacgctgcagattaatacagccaaagagataccccatggagacttatgc atcacagagatatacagtgagactcaccagggagcaggagaaagtaacatgcacttttct gaaaagaaacaagagaccacacaaagtcacagaattactcctaaagtcataggcacctcc aaagcacttgtgactgatgaatctgctttcagagggaagacagaagaaagaaggccaagc aagatggttgagctgcagttatccctctcaaatgatggtcacaagagcaccaatgctcct gctgtgaccctcataggggcagaaaaatgcaccccttcaggaagaggaccgagtgtacaa gaagacgggaccagccctgtaattgcaattcccctgagtgtgaaagagggcaacatccag tggtcaagcaaagtagtccagttttctagtagcaaagaggtcaagaggatccaaagtgca gctccatccatccccagggtggaggtgatcctagcctgttcagacagggaaaaagaagga cccacgtctctagctgaaagggggtgtgttgattctcaagtggaaggagggcagtcagaa gcacctccttctctgccctcctttgcaatctcatcagaaggcactgagcagggagaggac aaccagcactcagaaagggatcacagacctctcaagcacagggcaaggcacgcaagactc cggcgaagtgagagcctgtcagagaagcaggtcaaagaagccaaatctaaatgtaaaagt attgcattgctgctgacggcagctcccaatcccaattccaagggggtgttaatgttcaag aagcgtcgtcaaagggcgaggaagtatactttagtcagctacgggactggggagctcgaa cgtgacgaagacgaaggagaagaaggtgaagttgaagagggggacaaagaaaatactttt gaagtgagtttgcttgcaacaagtgagtcagaaatagatgaagatttcttctctgacatt gacaacgacaagaagattgtgacatttgattgggacagcggtctacttgaggttgaaaag aagacgaaaagtggagacgagatgcagacgcttccagagacaacaggtaaaggggccctc atgtttgccaggagacggcagaggatggatcagattacagctgagcaagaggagatgaag gcacgcaccatgcatgcagaggaacaaagggaagtcactgtgtcagagaacttccagaaa gtaagctcttcagcctatcaaacaaaagaggaagaaacgttaagacagcaaccctgcatt agcaaaagctatgcagacgtgagccagaacgatggtaaaactgtacaacaaaatgggttt ggtttagcaccagacacaaacctctcttttcagtcttctgaagctcaaaaagcagcatct ttgaacagaacagctaaacccttcccttttggggttcaaaaccgagcagctgcaccattt tcacccacgagaaacgtcactagtcctctttcagatttaccagcaccacctccctactgc tctatcagcccaccaccagaggctttatacagacctctgtcagctcccgcagcaagcaaa gctgcgccaattctgtggtcacacacagagccaaccgaacgcatagcatccagagatgag aggattgcagtgccagccaaaagaactgggatactgcaagaggcaaagagaaggagcaca tcaaagcctatgttctctttcaaagaagcacccaaagtaagtccgaatcctgccctgttg tcccttgtacacaatgcagaaggcaaaaaaggttctggagctggttttgagtcaggaccc gaagaagactacctcagtttgggagcagaagcttgcaatttcatgcagagtcaagcatct aagcaaaaggcccctcctcctattgctccaaaaccttcactcaaggtctctcctgctgct ggtaccccggtttcaccagtttggtcaccagctgtggcttctaacaaggctccttctttc ccagctccagcctcaccgcaggcagcatatcctgcagcacccaaatccccacagtatcct cattctccctctgccaatcccccaaatactctcaacctatctggtcctttcaaagggcct caggcaaccctagcgagtccaaaccacccagccaagacaccaaccacaccaagtgctgga gaaacaaagccgccctttgagatgccaccagatatgaggggaaaaggagcacaattattt gccagaaggcactctcgaatggagaagtacgtggttgattcagagactgtgcaagcaaac atggcacgagcctcatctccaactccatctttaccagcttcttggaaatactcatctaat gtccgagcacctccacctgttgcttataatcccatacacagtccatcttatcctcctgct gctaccaagcccttccctaagtccactgctgctactaaaaataccaaaagaaaacctaag aaaggtctcaatgctttggatattatgaaacatcaaccttaccaacttgatgcatcatta tttacttttcaacctcccagtaataaggaaagcctagctactaagcagataccaaagttg cccacttcaaaacaagctatgtccttccgactgcctggttctggatctcctacaaacgcc cgggcatcttcagtgtactctgtgccagcctacagttcgcaaccatcgttccaatcaaat gcctccaccccagtaaatgaatcatacacaccgacaggctattctgcattttctaagcca gaatccactacatcctctttgtttactgctccgaggccaaaattttcagcaaagaaagct ggcgtcattgcacaggaaagaagcagtggacgttcattatcacttcctgggaaaccttca ttcatttctcgagccacatctcccacttctcctcttatatttcagcctgcccctgactac ttcagcaagccagacacagcagctgacaagcctggcaagagactgactccttgggaagca gcagcaaaatcccctcttggtctagtggatgaagcttttgggccacaaaatatgcaggaa tccattgctgctaatgtagtatcagctgcacacaggaaaatgcttcctgagcctccagat gaatggaaaaaaaaagtttcttatgatcctccaggcccaagtgctagcctagccttatta ggaggaaagcaaccgggtgttacagcagcccgaaagagctctctgtctgtgtcaaatgcc accacacaggctggctctcagcagcagtatgcttactgcagtcaacgatcccaaacagat cctgatataatgtccatggattccaggtctgactatggcttgtcaacagctgattcaaac tacaatccacagccaaagggatggaggcgtccaacatga

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