Gallus gallus (chicken): 430616
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Entry
430616 CDS
T01006
Symbol
NUP98
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gga
Gallus gallus (chicken)
Pathway
gga03013
Nucleocytoplasmic transport
gga05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
430616 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
430616 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
430616 (NUP98)
03036 Chromosome and associated proteins [BR:
gga03036
]
430616 (NUP98)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
430616 (NUP98)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
430616 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
430616
NCBI-ProteinID:
XP_015136440
CGNC:
10169
Ensembl:
ENSGALG00000040018
LinkDB
All DBs
Position
1:complement(197038113..197076398)
Genome browser
AA seq
1797 aa
AA seq
DB search
MFNKSFGTPFGGNTGFGTTSTFGQNAGFGTTGGGAFGTSAFGANNNTGGLFGNTQAKPGG
LFSSNAFNQPATSSTSTGFGFGTSTGTSSSLFGTTSTGGGLFSSQSNAFAQSKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGNPSGSLFGPTSFTATPTGTTIKFNPPTGTDSMVKSGVST
TINTKHQCITAMKEYESKSLEELRLEDYMANRKGPSNPVGAGATTGLFGTSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTTTTGFGTGTTGGLFGQQTQTTSLFNKPFGQATTTQNTG
FPFGNTSTLGQPNTSTMGLFGATQPSQPGGLFGTAATTNAGTAFGTGTGLFGQANTGFGV
GGSTLFGSKPAGFGTTTTSTSFGTTTGGGLFGFGANNAGNSLFGNKPATGTLGTGLGTGF
GTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAAQ
QAVLQQHLNNLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSGSSLFSPVNRE
NDDLASPSEYPENGDRFFLSVPPEENHRQDGEREEDEDHHEVTRFYTNPIAKPIPQSPEN
TVHKHQNSVDDTIVALNPRAALRNGLEGSSEDASFHDDSLQDEREEETETVHHVHPAGIV
LTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIFFEGEVNLTNLNLDDIVHIR
RKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRGLIKSPERLAEMNYEGRLESV
SRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLKAEAKKLKTTPVPPPGHQ
PPQQMALNGKPTPPAQSPEVEQLGRVVELDSDMADVTQEPPQEPAVEDSMAEEPEAVPAS
AHIASTLGINPHVLQIMKASLLADEDDLDLILDHHSGKQPPKMDTSQEICSPRLPISKSQ
GQKKCSVAGLLQSKFADAIFQPPSTALYDLQEPRASRSSPSPACWSASTPLASAFAVPPS
VPEVQMRTVGVRRQQGLVPLENSITYQKGKLLMDMALFMGRAFRVGWGPNWTLVNCGDQL
SGSSGMEDLQCETAEYGFLPTPVAPKLLPESPFKVHVEKLNLEQRKMNRDKQLYLIPLEI
KLKHSTVHMDEQCPLLAPNPGVAAIHDYADWVRTASEDPAVMETVVKHWCLTWTLCEAIW
GNLKELEASLEEPSEYVLALERRRAFSRWLSETAAARIDEEVALTQHHNHVEAVFSCLTG
RRIGEACRLAQQAGNHRLALLLSQLVGSQPTRDLLTMQLVDWHRLQADCFIPEERLRIFA
LLAGKPVWQLSERISINVCSQLDWKRCMAIHLWYLLPPTASISQALAMYEAAFQTTSESE
KYACCPLPPYLXGSGCVIEEDDNAGRPLRDVCFHLLKLYSDRHYDLDQLLDPRSITSDPA
DYRLSWHLWEVLRALNYSHLCRQGQGVLNASYAAQLESEGLWEWAVFVVLHEPDTHIREK
AVRELLGRHCALCETPESWAKETFLTQRLCVPAEWIHEAKAVRARMEGDKHKEALFLFKA
GHWNECHKLVVRHLASDAIINENYKYLKGFLEDLSPPERSALIQDWELAGLVYLDYIRVI
EMVDRIQQLDCSTYELERLHTKVTSLCNRIEQIQCHNAKDRLAQSDMAKRIANLLRVVLS
LQHSPEPLSDGSPELHRVPLRLLAPHVGRLPMPEDYALEELRGLTQSYLRELTVVTQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatccttcggaactccttttggaggtaacactggctttggaacgacatca
acttttggacaaaatgctggctttggtactacaggtggaggagcgtttggcacatcagcc
ttcggggcaaacaacaacaccgggggcctctttgggaacacccaggcaaagccaggaggg
ctcttcagttcgaatgccttcaatcagccagccacctcctctaccagcactggctttggc
tttggaacctccactgggacatccagcagtctgtttggtaccaccagcactggtggaggc
ctcttctcatcccagagcaatgccttcgcacagagcaagcctgctggcttcggaaacttt
ggcacgagtaccagcagtggaggtctctttggaaccaccaataccacttccaatcctttt
gggaatccatctggctctctgtttggcccaaccagttttactgctactccaactggcacg
accattaagttcaatccgccaactggtacggatagtatggtcaagtctggagttagcacc
actatcaatactaagcaccaatgcattactgctatgaaggagtatgagagcaaatccctt
gaggagctgcgtttagaagactacatggcaaataggaaagggccctcaaatcctgtggga
gcaggagccactacaggcttgtttgggacttccactgctacttcaagcacagctacggga
ctttttggctcttctaccactaatacaggcttctcatatggacagaataaaactgctttt
ggaactactacgactggctttggaacaggaacaacaggaggtctttttggtcagcaaact
caaactacaagtctgtttaacaaaccatttggtcaggccacgacaacgcagaacacaggc
tttccctttgggaataccagcactctaggacagccaaacacgagcacaatgggtctcttt
ggggccacgcagccctcgcagcctggaggcctttttggaacagctgccactaccaatgct
ggcactgcgtttggaactggaactggtctttttggacaagcaaacacaggatttggtgtt
ggcggttcgaccctgttcggtagcaaacctgctggatttggaaccaccacgaccagtacc
tcgtttggtacaaccactggcggcgggctctttggttttggtgccaacaatgctggtaat
agcttgtttggaaataagcctgcaacggggacgctgggaactgggcttgggacagggttt
ggaacagcacttggggcaggacagacttcgttatttgggaacacccagcctaaactcggt
gggacgctgggaacaggagcgtttggagcaccaggattcaatacatccactgctactctg
ggcttcggagcccctcagcctgctgtagcactgacagatcctaatgcatcagctgcccag
caggcagtcctccagcagcatctcaataatttgacttattcaccctttggagattctcca
cttttcagaaaccccatgtcagacccaaagaagaaagaagagcggctgaaaccgaccaac
cccgcagctcagaaggccttaacaacacccacccactacaaactgactccacgtccagca
accagagtgcgcccaaaggctttgcagtctgcaggctctgccaagtctcagctctttgat
ggccttgatgatgatgagccatccctctccaatggtgccttcatgccaaagaagagcatc
aagaagttggttttgaagaacctcagtggcagcagtctgttctctcctgtcaatcgtgag
aatgatgacctggcatctccatcagagtatccagagaatggagacaggttctttttgtcg
gtacctcctgaagaaaaccacagacaagatggtgagcgtgaggaggacgaggatcaccac
gaagtgacgaggttttacaccaaccccatcgccaagcccatcccacagagccctgagaac
actgtgcacaaacaccagaacagtgtggatgacaccatcgtggccctcaatccgcgggca
gccctgcggaacggcctggagggcagcagtgaggatgcctcattccacgacgattccctt
caggatgaacgtgaagaagagaccgagacggtgcaccacgtccatcctgcaggaattgtt
ctaaccagagctggctattacaccatcccatctatggaggagctggccaggtttaccaat
gacagaaatgaatgtattgtgactgacttcaccataggccgtaaaggttatggatcgatt
ttctttgaaggagaagtgaatctaactaacctaaatctggatgacattgtacatatccgt
aggaaagaagttattgtctacccagacgatgaaagaaaaccacctattggtgaaggcctc
aatagacgagctgaagttacattagatggagtttggcctacggataaaacatctcgtggc
ttgataaaaagcccagaacgactggcagagatgaattatgaaggcaggctggagtctgtg
tctcggaagcagggcgctcgcttcaaggagtaccgccctgagactggatcttgggtgttc
aaggtggcacacttctccaagtatggcttacaagattcagatgaggaagaggaagagcat
cctttaaaagcagaagcaaagaagttaaaaaccacaccagtgccacctccagggcatcag
ccacctcagcaaatggccttaaatggcaagccaacgcctccagctcagagccccgaggtg
gagcagctgggcagggtcgtggagctggacagtgacatggcagacgtcacccaggagcct
ccccaggagcctgctgtggaggacagcatggcagaagagccggaggcagtgcctgcttct
gctcacattgcatcgacgctgggcattaacccccatgtcttacagattatgaaagcttcc
ttgcttgctgatgaagacgacctggatttaatcctggaccatcactctgggaagcaacct
ccaaaaatggatacttctcaggagatctgttctccaaggctccctatctcaaaatcccaa
ggacagaagaaatgctcagtcgctgggctgctgcaatcaaagtttgctgatgccattttc
caaccacccagcactgctctgtatgacctccaggagccgagggcatctcgcagctcccct
tcccctgcctgctggtcagcatccactccattagcatcagcctttgccgtccctccgtcg
gtccccgaggtacagatgaggacagtgggtgtccgcaggcagcagggcttggtccctctg
gagaactccatcacctatcagaaggggaagctgctgatggacatggctctgttcatggga
cgtgccttccgcgtgggctgggggcccaactggactctggtcaattgtggggatcagctg
agtgggtcgagtgggatggaggaccttcagtgtgagactgcggagtatggattcctgccc
actcctgttgctccaaaactactccccgaatcccctttcaaggttcacgtggaaaaactg
aacttggaacagaggaagatgaacagagacaaacagttgtatcttatccctctggagata
aagctgaagcacagcactgtccatatggacgaacagtgtcctctcctagctcccaatcca
ggggttgctgctattcatgactatgctgactgggttcgaacggcatctgaggatcctgct
gtaatggagactgttgtgaagcactggtgcttgacgtggactttatgtgaagccatctgg
gggaacctgaaggagctggaggccagcctggaggagcccagtgagtacgtcctggccctg
gagcgcaggagggctttctctcgttggctgtcggagacggctgcagcacggattgatgag
gaggttgctttgacccaacaccacaatcatgttgaggctgtgttcagctgcctcacgggg
aggaggattggcgaggcttgcaggctggcacagcaggcaggcaaccaccggcttgccctg
ctcctgtctcagctggtgggcagccagcccacacgggacctgctcaccatgcagctggtg
gactggcacaggctgcaggcagactgcttcatcccggaggagcgcctgcgcatcttcgca
ctgctggctgggaagcctgtatggcagctgtctgagagaatcagcatcaatgtgtgctca
cagctggactggaagcgctgcatggccatccacctctggtacctcctccctccaacagct
tctatctcccaggcacttgccatgtacgaggcagcgtttcagaccacatcagagtctgag
aaatacgcctgctgccctctgcctccttacctgngaggctctggttgtgtgattgaagaa
gatgataacgcaggaagacctctcagagatgtctgtttccatctgttaaagctctacagc
gacaggcactatgatctggaccagctgctggatcccaggagcataacatctgaccctgca
gactatcgcctcagctggcacctgtgggaggtgctccgtgccctcaactacagccacctg
tgcaggcaggggcagggcgtgctgaatgccagctatgctgcccagctggagagtgaaggc
ctgtgggagtgggctgtgtttgtggtgctgcatgagcccgatactcacatacgggagaag
gccgtgcgtgagctgctgggccggcactgcgctctgtgtgagacccccgagtcgtgggcc
aaggagaccttcctgacacagcggctctgcgtccctgcagagtggatccacgaagcaaag
gctgttcgagcccggatggagggtgacaagcataaagaagccctgttcctgttcaaggcc
gggcactggaatgagtgccacaagttggttgtgcggcacctcgcctcagatgccattatt
aatgagaactacaaatacctgaaggggttcctggaagatctctcccctccggagcgcagc
gcactcatccaggactgggagctggcagggctggtctacctggactacatccgtgtcatt
gagatggtggataggattcagcagctggattgttccacatacgagctggagcgtttgcat
accaaagtgacgtcgctgtgcaacaggatagagcagatccagtgccacaacgccaaggac
cgcctggcccagtcagacatggccaagcgcatcgccaacctgctgcgcgtggtgctcagc
ctgcagcacagcccggagccgctgtctgacggcagcccggagctgcaccgtgtgcccctc
cgcctgctggccccgcacgtgggccgcctgcccatgcctgaggattacgccctggaggag
ctgcggggcctcacccagtcctacctgcgggagctgacggtggtcacccagtga
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integrated database retrieval system
