Gallus gallus (chicken): 769052
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Entry
769052 CDS
T01006
Symbol
DCHS2
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-23 isoform X1
KO
K16507
protocadherin-16/23
Organism
gga
Gallus gallus (chicken)
Pathway
gga04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
769052 (DCHS2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gga04515
]
769052 (DCHS2)
Cell adhesion molecules [BR:
gga04515
]
Cadherins
Cadherin related
769052 (DCHS2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_CELSR2_9th
DUF5897
Motif
Other DBs
NCBI-GeneID:
769052
NCBI-ProteinID:
XP_040555717
CGNC:
54945
LinkDB
All DBs
Position
4:complement(19697973..19745908)
Genome browser
AA seq
2343 aa
AA seq
DB search
MACRLLLVAGILYLISAFSHLAHSMLLLVVSARDGGGLSSSTNAAVTVNILQTTLAPATF
ERSWYAFSVPIDAPEDSQVGAVKAREPPVLFLDSLEVVSYRILSGDPQGRFYIDSQFGII
CIKKELDHETQSVFMLTIQSQLRKFPVYSSTQVNISVIDVNDNPPVFLTRSDEVIISHTQ
PVGTAVYIAHAENKDSSLNGAFKYSLASNLTNAFSIDSGLGVVSLIXMVFEDKQQEYTLY
IAGEDHGSPPLSSWLLLSVTVEEQRMGPTLVFQKLVYQVEINEPTSPGACILQVRASLFD
PHCVSSRLTYSIESSTDSVAFGIRSDTGWIYLRKCLNYECAQILSFRALVSTSEGENSMQ
NASASVIVNVLDENNNSSVSVHESYFFKVEENPIPQGVIGTVTAVDKESGRNGQLSHFLL
SDGKHFKMNSNTGEIIKWVALDHEEQAHYQLTVLMTDHESPPLNVTMXNDNKPVFPRIVP
GKELSIEDIGYFQIHAVSGELRATRPVSYAERSSYRMTVTARDQGIPSLXGQAVVDMQVI
PLPTGRPVFSQDFKHFVIPENFKPARVFTSVKLLGNHLTANRKLCFSVAEDDDDVYFEVD
SWTEDLFLYKELDYETSSHFFLQVIIRDYNNNPPQNNTVFLSIDVEDLNDHSPYFQDDFK
VIGIEENVPAGTLVYTSNAKDGDGCSPNSKIQYSLEMSSMAENPFVVHPLYATLVTASPL
DKEITHSMILMVSATDQTINVADCRRDSLIAKIVILDVNDNSPSFISSPLCYVMEDAGVG
LLLHYATAKDPDEGGNGHIMYHLTSGNENGSFILDKITGLQSTAELLDHKVQEHYSLTVM
ALDDGSPALSATQVLTILVLDVNDESPVFLQQVYETAVYENQDPGXLVIRVEAVARDTGR
HSXLWYDILPGPGYEKLRINLDSRELLTAASLDRETQEVFSIKVLVQDGGTPSLSSTVTV
ICXVLDENDSSPKFFFPVFDIHIPENLQLSVVYVARAADMDAGNNGALRYKISGKLYPVI
IIKSGSICGNIGECFTLKNTSGKLLVTCILDREDVSNFTLIIECHDXGSPSRSSTALLHI
TVLDENDHSPLFEKNQYHISVREDLDEGTAILGLFASDRDDGPNGEVMHSLTGDTFGAFA
IDTVTGSIVTTKVLDREIKSQYTLRAVASDCSSHLRRSTTASIVEHINDVNDNDPVFLQS
PIRASVPVETTVNEMVATVRAEDVDLEPNGAIVFSLLAAETLFEIDSEMGDIVLQEPLAS
EDFTMTLVIIFTKEQEEEISFSHSLYEASVPENSAADSGVECPLGKFADDTKLSGAANTV
GGREAIQRDPDRLEKWSHENLMSLRFASKHISATDLDSQLNGETEYVIWSGNENAAFLID
SARGTLSTNTVLNHVIGNHEDTQGRACMVRKQVNLPEFISVGTTVLTLLWIAIQSNGMIS
YKILSSLEGFSTDHKNGLYALECELLQIVFYFHVHCSLLRQWHRGENNAFIQVLVAAVDS
SSPALSTVTSIEVHIEDINNHALQFTRALYNLSVSESASVGESILAFSVTDYDWTCENAY
NEYSIIDGNAENLFNVETSVTESETSYKLVGNLVLNSLLDTETTASYRLVLLASDHGKPS
LNSTATVLITVLDVNDNPPEFSSSEYHVHVKEGLPVGSHVTEVLANDPDAGSNAEITYAI
TSGNDKQYFQMDGKTGSVDLMKTLDYEDTTKFTSLIQGTDGRADVKSVAFSVVHFSVLDD
NDYAPLFLFPSMNCIVSENLPXLFFVCTVTALDFDKGSYGHLTYSIQSSYLAQRKAPGDH
DMFFIDSLTGDIHTKQTFDYESQNRYCLIIQAKDKGDLLATITVQVDIEGRDEFDPVFSQ
DQYFFNLPRKNEAGQLLGKVTASDNDGEQDGVVCSSLLKTSAFFSVNQNSGGIYLTQTVH
QNRNDSKRNDDTLKLLVRAQSPKMXPKFAVCTVLMNVSDSPESYPFVSTYSLSISLSASL
IIFLLLALLSVIALILRYKQKDVINSCVKKRTLSFSATDVNLAREDMVLKVXQKIQNTES
GMLPTGVIADWLSLSGIRERKDNDVPCRHSGFSGHNSAKGETAEDEEIKRINEHPCRKSP
GSTLSERDSRVPDSGIPRESDHLSCLSGETNIAATTQSVESIPAVQCKGGEACDAAYPSN
KVLSQPLKKTEXKKDILTDLTRDYTLVSDRQDSGCDLLATLGTSDEDLRGSYSWDCLLSW
ETRFQPLSSVFSDIAKLKDESGCVCSLPKEKPFVFPPPLVTSVAQPGIRTVPPWMPNVIS
GQAFKKCLRSSLIHSLGXSFSPSLSLLTMQTPTASALTFDGRMVGIYLICPSHELATEEE
IQV
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcaggctcttgcttgttgctggaattctttacctgatctcagctttcagtcac
ctggcacattctatgctgctcctggtagtatctgcacgggatgggggtggtctttcctca
tccaccaatgcggctgtcacagtgaacatccttcagaccactttggcccctgccactttt
gagagatcctggtatgctttttctgttcccatagatgcacctgaagacagccaagttgga
gctgtaaaggctagagagcctccagttctatttctagattctttagaagtggtttcatac
agaattttgtctggtgatccacaaggaagattctatattgactcccagtttggtatcatt
tgcatcaagaaagagcttgaccatgaaacccagtctgttttcatgctcaccattcagtca
cagttgagaaagttccctgtgtacagtagcacccaggtcaatatatctgtaatagatgtt
aatgacaatcctccagtatttcttaccagatctgatgaggtaattatttcacacacacag
cctgttggtactgctgtgtatattgctcatgcagaaaataaagacagcagcctcaatggg
gcattcaaatacagtcttgcaagcaatctgacaaatgcatttagtattgattcaggcctt
ggagtggtaagcctcatctgaatggtgtttgaggataaacagcaagaatatactctgtac
atagcaggtgaagaccatggaagtcctcctctgagttcttggctgttgttgtcagtgact
gttgaagagcagaggatgggccccactttggttttccagaagttggtgtatcaagtagaa
atcaatgaacctacatctccaggtgcctgtatccttcaggttcgagcctccttatttgat
ccacactgtgttagctccaggctgacatattccatagagtctagcacagattctgttgca
tttggaatcagatctgatactggctggatttatctcaggaaatgtttgaactatgaatgt
gcacagattcttagttttagagccctggtcagcacctcagagggggaaaactctatgcag
aatgcaagtgcatcagtaatagtaaatgtcctggatgaaaataataattcctctgtgtct
gtgcatgagagctacttcttcaaagtggaggaaaatccaattcctcagggtgtgattggc
actgtcacagctgttgacaaagagtcgggaagaaatggacaactttcacatttcctcctg
tctgatggaaagcatttcaagatgaattccaacacaggtgaaattataaaatgggttgca
ttagaccatgaagaacaagcacactaccagctgactgtactaatgactgatcatgagtca
ccaccacttaatgtcacgatcaacgataataaacctgtcttccctcggattgtgcctgga
aaagaattaagcatcgaggatataggatacttccagattcatgctgtcagtggggagttg
agagcaacccggcctgtgtcatatgctgagagatcaagctacagaatgacggtcacagcc
agggaccaggggataccttccctctaaggacaggctgttgttgacatgcaggtaatccca
cttcccacagggagacctgtcttctctcaagatttcaagcactttgtcatacctgaaaat
tttaaacctgcacgagtattcacttctgtaaaattgcttggtaaccatctgacagctaac
aggaaactgtgttttagtgttgctgaagatgacgatgatgtttattttgaagtagatagt
tggacagaagacctttttctttacaaggaacttgactatgaaacatcttcacacttcttt
ttgcaagttattataagggattacaataataaccccccacagaataatactgtctttctc
agtattgatgtagaagatctgaatgatcattctccatattttcaagatgacttcaaagtg
attggcatagaggaaaatgtacctgctggcactctggtttacacatctaatgcaaaagat
ggagatggctgttctccaaacagcaaaatacaatattccctggaaatgagtagcatggct
gaaaatccatttgttgttcaccctttatatgctaccttggtaacagcatccccactggac
aaggagattactcattctatgatccttatggtgtctgcaacagaccagacaataaatgtg
gctgattgcagacgtgattctctgattgcaaaaattgttattctggatgtcaatgacaac
agtcccagctttatatcttcacctctttgctatgtcatggaggatgcaggtgtgggcctc
cttctgcactatgcaactgcaaaggatcctgatgaaggaggaaatggacatattatgtat
cacttaacttcaggtaatgaaaacggatcattcatattggataaaatcacaggactccaa
agtacagccgagctcctagaccacaaggttcaggagcactacagtctgacagtcatggct
cttgatgatggcagtccagctctctccgcaacacaggttctaaccatccttgttcttgat
gtgaatgatgagagcccagtatttctgcagcaggtttatgagactgcagtttatgaaaac
caggatccagagctggtcataagagtagaagctgtggctagagacacaggacgacattcc
tagctttggtatgatatcttaccaggacctggatatgagaaactcaggataaatctggac
agcagagaattgttaacagctgcatcactggacagggaaacccaggaggttttcagtatt
aaagttttggttcaagatggtggaactccatctctatcaagcacagtgacagttatctgc
taagtcctggatgaaaatgatagctctcccaagtttttctttcctgtctttgacattcat
attccagagaatctacaactttcagtagtttacgttgccagggcagcagacatggatgct
ggtaataatggagctctaagatacaaaataagtggtaagttatatcctgtcattattatt
aaatcaggaagcatatgtggaaatattggagaatgcttcacactaaagaatacttctgga
aaactgctggtcacttgtatcttagacagagaggatgtcagcaattttactcttataatt
gagtgccatgtaggtagtccatcaaggagttccactgcgctgctgcacataactgtcttg
gatgaaaatgaccacagcccactgtttgaaaagaaccagtatcacatctctgtgagagaa
gacctagatgaaggcacagccatcctgggcctctttgcttctgacagagacgatggccca
aatggcgaagttatgcactcgctcactggagacacctttggagcttttgccattgacact
gtaacaggctccatagttactacaaaggtgctggacagggagatcaagtcccagtatacg
cttagggctgtggcaagcgactgtagctcccatttgcgaagaagcactactgccagcatt
gtggaacacatcaatgatgttaacgacaatgatccggtgtttctgcagagccccatcagg
gcctctgtgcctgttgaaaccacagtgaatgagatggtagccactgtgagagcagaggat
gtggatctggagccaaatggagctattgtttttagtttgttggcagcagaaactttattt
gagattgactcagagatgggtgacattgttcttcaggagcccttagcttctgaagacttc
accatgactctggtcattatctttacaaaggaacaagaggaggagatttcgttcagccat
agcctgtatgaagcaagtgtgcctgagaacagtgcagcagacagtggcgttgagtgcccc
ctcggcaagtttgcagatgacaccaaactgagtggtgcagccaatacagtagggggaagg
gaagccatccagagggacccggacaggctggaaaagtggtcccacgagaatctaatgagc
ctcagatttgcttccaaacatatatctgcaactgaccttgacagccagctgaatggagaa
acagaatatgtaatttggtctggtaatgaaaatgcagcgtttctaattgattcagcacga
gggactttgtcaactaatactgtcctaaatcatgttataggaaaccacgaagacacccag
ggcagagcttgcatggttcggaaacaggtgaacttgccagagttcatttcagtgggtacc
actgttctgactctgctgtggatagctattcagagcaatggaatgatttcctacaaaatt
ctctcttccttggagggattttccactgatcacaagaatggtttatatgccttagagtgt
gaacttttacaaattgtattttattttcacgttcattgttcactactgaggcagtggcac
aggggggaaaacaatgcctttattcaggtactggtagctgctgtggacagtagcagtcct
gctctgagcacagtcacctctatagaggtacacatagaagatataaataaccatgccctt
cagttcacaagagcactgtacaatctcagcgtgagtgagagtgcctcagtaggagaaagc
atccttgcattttcagtaacagactatgactggacatgtgaaaatgcatacaatgagtac
tctattattgatggcaatgctgagaacttattcaatgtggaaacaagtgtcacggagtca
gaaacatcctacaagcttgttggcaatcttgttttgaacagtcttcttgacacggaaact
actgcttcctatcgtctggtcctccttgcctctgatcatgggaagccctccttgaactca
actgctaccgtgctaataactgtactggatgtcaacgataatcctccagaatttagcagc
tcagagtaccacgttcacgtcaaagaaggcctccctgtcggtagccatgtcacagaagtt
ttagcaaatgaccctgatgcaggcagtaatgcagagatcacttatgctataacttctgga
aatgacaagcagtattttcagatggatgggaaaactggatctgtggatttgatgaaaact
ctggattatgaggataccacgaaatttacttcgctcattcaaggcacagatggaagagct
gatgttaaaagtgtggctttttctgttgtccactttagcgttctagatgacaatgactat
gctccactgtttttgtttcccagcatgaactgtattgtcagtgaaaacctgcagcttttt
tttgtatgcactgtcactgccctggattttgataaaggctcctatggacatctcacctac
tccatccagtcttcatatttggctcagcgtaaagctcctggagatcatgacatgtttttc
attgactctttgacaggagatattcatacaaagcaaacatttgactatgaaagtcagaat
aggtactgtctcataatccaagcaaaagacaaaggtgacttactggccacaattacagtt
caggtagatattgagggcagagatgagtttgacccagttttctcacaagatcagtatttc
tttaatctccctaggaaaaatgaagcaggccagttgcttggcaaggtgacagcatcagat
aatgatggtgaacaggatggagttgtttgttcctccctgctaaaaacttctgcattcttt
tctgtaaatcaaaacagtggtggtatttatttgactcaaactgttcaccaaaatagaaat
gacagcaaaaggaatgatgacaccttgaaattgttggtaagggctcagagcccaaaaatg
tagccaaagtttgcagtatgtactgttctgatgaatgtttccgattctcctgaaagttat
ccttttgtgtcaacctacagtctgtccattagcctttctgcctctctcattattttcctg
ctgcttgccttgctgtcagttattgcacttattctgagatataagcagaaagatgtgata
aactcttgtgtgaaaaaaagaacattatccttctcagctactgatgtgaatttggccaga
gaagatatggttcttaaggtctgacagaaaatccaaaatactgagagtggtatgcttccc
acgggtgtcatagcagattggctgagcttgtcaggaatcagagagaggaaagacaatgat
gtgccctgcaggcattcaggcttcagtggccacaattctgccaaaggagaaactgcagag
gatgaagaaatcaaaaggatcaatgaacatccttgcaggaagagtcctggctccacactg
agtgagcgagactcccgggtgccagattcagggatcccaagggagtctgaccacctttcc
tgcctgtctggggaaaccaacattgcggctaccacgcaaagcgtggagagcataccggct
gttcaatgcaaaggtggagaagcctgtgatgcagcctatccaagtaacaaagtgttgtct
cagccacttaaaaaaactgataagaaggacatattgacagacctcacaagagactatacc
ttagtatcagataggcaggactctgggtgtgatttgctcgcaactcttggcacctctgat
gaggacctcagaggcagttacagctgggattgcttgctcagctgggaaaccagatttcag
cctctctcctcagtcttcagtgacattgcaaaactgaaagatgaaagtggatgtgtttgt
agccttcctaaggagaagccttttgttttccctcctcccttggtaacatcagtagctcaa
cctggcataaggacagtaccaccatggatgccaaatgtaatatctgggcaagcatttaaa
aaatgccttcgttcttcccttatccatagtcttggtagtttttctccttctctatctttg
cttaccatgcagacacctactgcttctgcattaacctttgatgggagaatggtaggaata
tatcttatttgtccaagccatgaacttgcaacagaggaggaaattcaagtctag
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integrated database retrieval system
