Gallus gallus (chicken): 769489
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Entry
769489 CDS
T01006
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03082
ATP-dependent chromatin remodeling
gga03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
769489 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
769489 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gga01009
]
769489 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gga03021
]
769489 (SMARCB1)
03036 Chromosome and associated proteins [BR:
gga03036
]
769489 (SMARCB1)
Protein phosphatases and associated proteins [BR:
gga01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
769489 (SMARCB1)
Transcription machinery [BR:
gga03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
769489 (SMARCB1)
SWI/SNF complex
769489 (SMARCB1)
Chromosome and associated proteins [BR:
gga03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
769489 (SMARCB1)
PBAF complex
769489 (SMARCB1)
SWI/SNF complex
769489 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
769489
NCBI-ProteinID:
NP_001034344
CGNC:
4462
Ensembl:
ENSGALG00000005983
UniProt:
Q5ZK40
LinkDB
All DBs
Position
15:8283579..8293534
Genome browser
AA seq
386 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEEDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHENQRSHSPRRYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTY
LREQKAKRNNQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHEN
ASQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIAS
AIRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCS
ELGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDA
EMEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaaaacctttgggcagaagcccgtcaagttccagctggag
gaggacggcgagttctatatgatcggctccgaggtggggaactacctgcgtatgttccgg
ggctcgctgtacaagaggtatccctcactctggagacgactagccacagtggaagaaagg
aagaagatagtggcatcttcacatgaaaatcagcggtctcacagtcccagaagatatcat
ggatatacaacattagccaccagtgtgacactgttaaaggcctctgaagtggaagagatc
ttggatggaaatgatgagaaatacaaggcggtgtctatcagcacagaacctcccacctac
ctcagagaacagaaggcaaagaggaacaaccagtgggtgccgacactgcccaacagctct
catcacctggatgcagtgccatgctcaacaacaattaacagaaatcgcatgggcagggac
aagaagaggactttccctctgtgctttgatgaccatgacccagcagtcatccatgagaac
gcatcccagccggaggttctggttccaatcaggcttgatatggaaattgatgggcagaaa
ctcagagatgcatttacatggaacatgaatgaaaagctgatgaccccagaaatgttctcc
gagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctattgcctct
gccatccgacaacagatcgaatcatacccaactgacagcatcctcgaggaccagtcagac
caacgtgttattattaagctaaacatccacgtagggaacatctcccttgtagaccagttt
gaatgggacatgtcagagaaggagaattcaccagagaagtttgccttgaagctgtgctca
gagcttggcctgggtggggagtttgtcactactattgcctacagcatccggggacagctg
agctggcatcagaagacatacgccttcagtgagaaccctttgccgactgtggaaatcgcg
attcgcaacacgggggatgccgaccagtggtgccctcttctggaaaccctcacagacgcc
gagatggagaagaagatcagagaccaggacagaaatacaaggcgtatgagacgcttggcc
aacactgctccagcctggtaa
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integrated database retrieval system
