Gallus gallus (chicken): 770421 Help Entry 770421            CDS       T01006                                  Symbol SYNPO Name (RefSeq) synaptopodin isoform X1   KO K21112   synaptopodin Organism gga  Gallus gallus (chicken) Pathway gga04530   Tight junction Brite KEGG Orthology (KO) [BR:gga00001]  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     770421 (SYNPO) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Calsarcin Motif Other DBs NCBI-GeneID:  770421 NCBI-ProteinID:  XP_025010781 CGNC:  56015 LinkDB All DBs Position 13:complement(13796876..13809102) Genome browser AA seq 1111 aa AA seqDB search MAAPSRRISRGAVRSAVPGRARERAAAPPAAPAPPAPARRPPPGPVPRAEPLQLSCPPPP PLVQSSGGGTGNGTAGLSRSSSLSEKELKEAKARSRRIVAQLTTAPSPSSKGVLLFHRRR QRVDGLTGTGTGHGTGLPLSLGAQPGDMETGEGHSSRGTLGEQEDVASRQESPTEAQQVP LSIYLKENMALAAANGVHKEKVESEVGGVQGTGDSLGTRVATPAPPESACVPKQKNGEVP SVPVVTANTPMGTASTSLGTVSMPTGTASMTMGTAGTPLGTDSVSMGTVTMPVVTANMTV RRAGTPIGMAGTPVVTASAPVVTASIPAGVAMANTAMGTASEPMVSANITTGTPSAPMVT ASVPTGAASMPVGTASTHIVTTSVPMGTASTHTVAANIPMGMADAAMGTANAPMGTASPP TVTSNAPVVTSNIPTVTASTPPGTAPPATQAQSGAQSRQYYEVHLTLAKPKPVKNRTARP FGTQTPPGLSQPPERAPGTEPPPPTYAETLGSPPPLSRVRSPPTYSALYPPGEQKAPSGP SYGLAAVVPLPKTGILEESAARRGHKKSMFTFVEKPKLGPNPDLLDLVQSADIRKKQKEH GDPGAEDEPFALGAEAANFVPASASRAAQPLPVPDDAPAWSSCLKSPMVKPKPKPQPSHN LSEARGKGAELFARRQSRMEKFIIEAPSQPELLRSPSPTMSLPPSWKYDANACLSPMVSR HPTRSPSQPSKTPPASLYGNNPTENEAELSKHQPYQLQPSLFILSPSKAPARSMPPPRPS PPSTYSYPQQTSCPTSPLPPSPIWQPPTTHSAASSPFLSATGALPMTHSAGGGGAELLLA SPCHGRSPRAKGGFQAPRPSYSTRNAGIEPQERRPSLPASPTWTPRLARHQGGQDGWASP VSVPELEQGPPRSPPWSERSLSPQRQDAEPRASRQMQARLARNIINAARRKSSSPKPPGP DGSRPFTPPAVGPPGLPQGCKAAAPQRARSVPAVPGSPSPSHRSPLTEGPCASPGVSRAT WAEGRRLLLPPSPAGPSPTPKSPLPSPVVGARSPAKRYSSRSPTDSDVSIDSEDSGTKSP GIHSFNLCPRGWSGSLRLKAGGLPSGAHCTS NT seq 3336 nt NT seq  +upstreamnt  +downstreamnt atggcggccccgtcccgtcgcatctcgcgcggcgcggtgcgatccgccgtaccggggcgg gcacgggaacgagcagcggcacccccagcggccccggcccccccggcccccgcccgccgc cccccccccgggcccgttccgagggcggagccgctgcaactttcctgcccgccgcctcct cccctggtgcagtcgagcggcggcggcaccggcaacggcaccgcgggtctctcccgcagc tccagcctctctgagaaggagctgaaagaggcgaaggcgcggagccgcaggatcgtggca cagctcaccacggcacccagccccagctccaagggcgtgctgctcttccaccgccgcagg cagcgcgtcgacgggctcactgggactggcacggggcatggcacggggctgcccctgagc ctgggggcacagccaggagacatggagacgggcgaggggcacagcagccgggggacgctg ggggagcaggaggatgtggcatctcgccaggagtcccctactgaggctcagcaagtccca ttgagtatctacctgaaggagaacatggcactggctgctgccaatggtgtgcacaaggag aaggtggagagcgaagtgggaggggtccaggggacaggggacagcttggggacaagagtg gccactcctgccccaccagagagtgcgtgcgttcctaagcagaagaatggtgaggtgccc agtgtgcccgtggtgacagccaacacacccatggggacagccagcacatccttagggacg gtcagcatgcccacagggacagccagcatgaccatggggacagctggcacacctctgggg acagacagtgtatccatggggacagtcaccatgcccgtggtgacagccaacatgaccgtg aggagagctggcacgcccatagggatggctggtacacctgtggtgacagccagtgcaccc gtggtgacagccagcatacctgctggtgtggcaatggccaacacagccatggggacagcc agtgagcccatggtgtcagccaacataaccacagggacacccagcgcacccatggtgaca gccagtgtgcccactggggcagccagcatgcccgtagggacggccagcacacatatagtg acaaccagtgtgccaatggggacagccagcacgcacacagtggcagccaacataccgatg gggatggccgatgcagccatgggaacagccaatgcgcccatggggacagcaagtcctccc acggtgacatccaacgcacccgtggtgacatccaacatacccacagtgacggcaagcaca cccccagggacggctcccccagccacgcaggcacagagcggggctcagagcaggcagtac tacgaggtgcacctcaccctggccaaacccaaaccagtgaagaaccgcacggcgcggccg ttcggcacccaaacaccccccgggctgagccagcccccggagcgagcccccggcactgag cccccgccacccacctatgcagagacgttgggcagcccacccccactcagcagggtccgc tcaccccccacctactcggccctgtacccccccggggagcagaaggcaccgtcaggcccc agttatgggctggcggcagtggtccccttgcccaaaacgggcatcctggaggagtcggcg gcacgtaggggccacaagaagtccatgttcacctttgttgagaagcccaagttgggcccc aaccctgacctgctggatttggtgcagagcgcagatatcaggaagaagcagaaggagcat ggggatcccggtgccgaggatgagccctttgctttaggggccgaagccgccaactttgtc cccgccagcgcatccagggctgcgcagcccctcccggtgcccgacgatgccccggcgtgg tcctcctgcctcaagtctcccatggtgaagccgaagccgaagccgcagcccagccacaac ctgagcgaggccagagggaagggggctgagctcttcgcccgccggcagtcccgcatggag aagttcatcatcgaggctccctcccagcccgagctgctgcgctccccatcgcccaccatg tcgctgcctccctcctggaagtatgatgccaatgcttgcctgtcgcccatggtctccaga caccccaccaggagcccatcccagccctccaaaaccccccctgcctctctctacggcaac aacccgacggagaacgaggcggagctctccaagcaccagccctaccagctccagccttcg ctcttcatcctctccccatccaaagctccggcgaggtccatgccaccacccagaccctca cctcccagcacttactcctacccacagcaaacctcctgccccacctccccgctgcctccg tcccccatttggcaacctcccaccacacacagtgccgcttccagccctttcctcagtgcc accggggctctgcccatgactcacagtgccggaggcggtggtgcagagctgctgctggca tcgccgtgccacgggcgctcccctcgagccaagggcggcttccaggcacctcgaccctcc tactccaccaggaacgcggggatcgagccacaggaaaggcggccgtccctccccgcctcg cccacctggaccccacggctggcgcggcaccagggcggccaggacggctgggccagcccc gtctcggtgcccgagctggagcaggggccgccccggtccccgccgtggagcgagcgctct ctgtccccgcagcggcaggacgccgagccccgcgccagccgccagatgcaagcgcggctc gccaggaacatcatcaacgcagcccgcaggaagagctcctctcccaaacccccggggccg gatggctcccggcccttcaccccccctgccgtgggtccccccggtttgccgcaggggtgc aaagccgcggccccgcagcgtgcccgcagcgtgccggctgtgccgggcagcccctcacca tcgcacagatcgcccctaacagaggggccctgcgcctccccaggggtgtcccgagccacc tgggcggagggccgccggctcctgctgccacccagcccggccgggccgtcccccactcca aagagccctttgccgtcgccggtggtgggcgcgcgctccccggccaagcgctacagctcc cggtccccgacggactcggacgtctccatcgactccgaagactcgggaaccaagagcccg ggcatccacagcttcaacctgtgtccgcggggctggagcgggagcctgcggctgaaggcg ggggggctgccgtcgggggcccattgcacctcctag

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