KEGG   Gallus gallus (chicken): 771795
Entry
771795            CDS       T01006                                 
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
gga  Gallus gallus (chicken)
Pathway
gga03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    771795 (PRPF38A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gga03041]
    771795 (PRPF38A)
Spliceosome [BR:gga03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    771795 (PRPF38A)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    771795 (PRPF38A)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 771795
NCBI-ProteinID: NP_001264596
CGNC: 8070
Ensembl: ENSGALG00000010627
UniProt: E1C6A8
LinkDB
Position
8:24744320..24748574
AA seq 312 aa
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRGYRDLDKPRRSPAIRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq 939 nt   +upstreamnt  +downstreamnt
atggcgaaccggacggtgaaggacgcgcatagcatccacggcaccaacccgcagtacctc
gtggagaagatcattcgcacccgcatttacgagtccaagtattggaaagaggaatgcttc
ggcctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tacggcgggaatatcaagcccacgcctttcttgtgcctgacgctgaagatgctgcagatc
cagcccgagaaggacatcattgtggagttcataaaaaatgaggacttcaagtatgtccga
atgctcggtgcgctgtacatgaggttgacgggcacagctattgactgctacaagtatctt
gaaccgctgtacaatgactatcgaaaaataaaaagtcagaacagaaatggggaatttgaa
ctgatgcatgtggatgaatttatcgatgaactgctccatgaggaacgtgtgtgcgatata
attctgcctcgactgcagaaacgatatgttctagaagaagctgagcaacttgaacctcgt
gtcagtgctctggaagaagatatggatgacgtagaatctagcgaggaggaagaagaggaa
gatgaaaagctggagcgagtaccctctcctgatcaccgcagaagaggctacagagacctt
gacaaacctcgcagatctccagctatacgatacaggcggagcagaagcaggtctccacga
aggcgaagccgctctccaaagagaagaagtccatcaccacgccgggagaggcatcgcagc
aaaagcccaagacgacaccggagcagatccagggagaggcgccacagatcaagatctaaa
tctccagggcatcatcgtagtcacagacacagaagtcattccaaatcacctgaaagatct
aagaaaagtcacaagaagagtcgtcgagggaatgaataa

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