Gallus gallus (chicken): 771873
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Entry
771873 CDS
T01006
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain precursor
KO
K08131
collagen type IX alpha
Organism
gga
Gallus gallus (chicken)
Pathway
gga04510
Focal adhesion
gga04512
ECM-receptor interaction
gga04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
771873 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
771873 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
771873 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gga00535
]
771873 (COL9A1)
Proteoglycans [BR:
gga00535
]
Extracellular matrix (ECM) proteoglycans
Others
771873 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
771873
NCBI-ProteinID:
NP_001094381
CGNC:
11923
Ensembl:
ENSGALG00000015970
UniProt:
F1NQ20
LinkDB
All DBs
Position
3:82821169..82887349
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AA seq
920 aa
AA seq
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MKSNWKITAFLYMCSFLGSFISATIQQQSRLPVILGARQRTDLCPTIRIGQDDLPGFDLI
SQFQIEKAASQGIVQRVVGSTALQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGPMKSVEFSYKGVDGSLQTASFLHLPFLFDSQW
HKLMISVETTSVTLFIDCIKVETLNIKPKGKISVDGFSVLGRLKNNPQISVPFEVQWMLI
HCDPLRPQREGCGELPARISQTVIERGLPGPPGPPGPPGPPGVPGIDGIDGERGPNGPPG
PPGPDGDAGKAGSPGLPGEPGADGLTGPDGSPGATGPKGQKGEPGPPGARGLPGKGLLGP
PGPAGAAGLPGEVGRAGPPGDPGKRGPPGPPGPPGPRGTIGLQDGDPLCPNACPPGRPGH
AGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGITGPKGN
KGARGLDGDPGPQGLPGAPGDQGQRGPVGEEGPKGERGPQGTRGINGLPGPKGESGLPGV
DGREGIPGMPGAKGEPGKPGTPGDTGPPGLPGLPGSPGMKGIPGPKGNRGPPGVPGLMGN
SGKPGEQGPEGEAGPTGPRGPPGSRGEPGPAGPPGLPGKWGPQGDIGLPGLPGPPGLPGG
KGDRGSAGEPGPKGEQGAPGSEGDAGEKGDLGDMGLPGAKGSVGNPGDPGSRGPEGSRGL
PGMEGPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHIKQVCMRVMQEQLSQLAASLR
RPEFGAPGLPGRPGPPGAPGPPGENGFPGQLGPRGLPGLKGPPGEIGRKGPKGEAGERGE
RGFPGRGVKGLPGPRGLPGEPGKPSYGREGRDGVRGPPGVAGQPGIPGPPGPPGPPGYCE
PSSCRMQAGQRAAGKNMKGP
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaactggaaaattacagctttcttgtatatgtgtagttttctggggtctttc
atctcagctaccatccagcaacaatcaagattgccagtcattctgggtgctcgtcaaaga
actgatctctgcccaacaatcaggattggccaagatgacttgccaggctttgacctgatt
tctcagttccagatagaaaaagctgcttctcaaggaattgtccagagagtagtgggttct
actgctctacaagtggcttataaattgggacccaatgtagacttcaggattccaaccagt
gcaatatattccaatggattgcctgatgaatactcctttcttactacttttcggatgact
ggagccacacttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa
caagttggagtgaatctcaatggtccaatgaaaagcgttgagttttcttataaaggagtg
gatggaagtctccagactgcatcatttttacatttgcctttcttgtttgattcccaatgg
cacaagcttatgataagtgtggaaacaaccagcgttacactttttattgactgtataaag
gtagaaaccctaaacataaaaccaaaggggaaaatcagtgttgatggcttctcagtgctt
ggaagactcaaaaataatcctcaaatttcagttccgtttgaagtccagtggatgctgatt
cactgcgatcccctgcggccccagagagaaggttgtggtgagctcccagcccggataagc
cagacagtgattgagagaggtcttcctggtccaccaggccccccaggtccaccagggcca
ccaggagttcctggcattgatggcatcgatggagagagaggacctaacggcccccccggt
ccaccgggtccggacggcgacgcaggcaaagcgggatccccgggcctgcctggagagcca
ggagctgatgggttaacaggccctgatggatcaccaggtgccacaggaccgaaaggacag
aagggtgagccaggacctccaggtgctcgtggacttccgggcaagggtcttcttggacca
cctggtccagctggtgctgcaggacttcccggtgaagtaggccgtgctggcccacctggt
gatccaggaaaaaggggaccaccaggaccaccaggaccaccaggccctcgaggaacaatt
ggtctgcaagacggtgacccattgtgtcccaatgcttgtccacctggccgcccaggacat
gctggcctaatgggaatgaagggacagaaaggctcaaaaggagaatctggtgaaccagga
aaacaaggttataagggtgaagaaggggatcaaggtcccattggtgaagttggagctcaa
ggccctccaggcatcctaggtatcagaggtataactggaataacaggacctaaaggtaac
aaaggagctcgtggccttgatggcgatcctggtccccaaggtcttcctggtgcacctggg
gatcaaggacagagaggtccagtgggagaagagggtccaaagggagaaagaggtcctcaa
gggacaagaggaataaacggtctccctgggcctaaaggagagtctggcttgccaggagtt
gatggccgggaaggtatccctggaatgcccggagcaaagggtgaaccaggaaaacctggt
actccaggtgatacaggacctccgggattgccaggtttaccaggctctccaggtatgaaa
gggattcctggcccaaagggtaatagaggtcctcctggagtgccgggtttgatgggaaat
tctggcaaaccgggtgaacagggaccagagggggaagcaggtccaacgggaccccgggga
ccaccgggtagcagaggagagccaggtcctgcaggtcctccaggtttaccagggaaatgg
ggtccccagggtgacataggacttcctggactgccaggtcctccaggcctacctggtggt
aagggtgaccggggttcagcgggtgaaccaggacctaagggtgaacaaggtgcacctgga
tcagaaggagatgcaggagaaaagggtgacttaggtgatatgggattaccaggtgcaaag
ggatctgttggtaatcctggagaccccggttcccgtgggccggagggaagtcggggactg
cctggcatggaagggccacgaggtgcacctggaccacgaggcttgcagggtgaacaaggt
gctccaggtctgcctggcagccaaggtccagctggaaaagaaccaactgatcagcacatt
aagcaagtctgcatgagagtcatgcaagaacaactctctcagctggcagccagtcttagg
cggccagaatttggtgctccaggtcttcctggccgacctggacctccaggtgctccaggg
cctcctggggaaaatggtttcccaggacagcttgggccccgtggcttgcctggccttaaa
ggtcctcctggtgagatcggtcgtaaaggtccaaaaggtgaagcaggagaaaggggagaa
agaggatttccaggcagaggagtgaaaggtctcccgggaccgagaggtctcccaggtgaa
ccaggcaaacccagctatggcagggaaggccgtgatggtgtacgaggtccccctggggtg
gccggtcagcctgggattcctggtcctcctggccctcccggccctcctgggtactgcgag
ccgtcgtcttgccgaatgcaggctggacagagagctgctggtaagaacatgaaagggcca
tga
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