Gallus gallus (chicken): 772284
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Entry
772284 CDS
T01006
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
gga
Gallus gallus (chicken)
Pathway
gga03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gga00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
772284 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gga03019
]
772284 (NDC1)
Messenger RNA biogenesis [BR:
gga03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
772284 (NDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
772284
NCBI-ProteinID:
XP_015146678
CGNC:
8159
Ensembl:
ENSGALG00000031606
UniProt:
A0A8V1A6U4
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All DBs
Position
8:complement(25436987..25452550)
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AA seq
745 aa
AA seq
DB search
MPGLAVLPTLCARAASCRGGRGEGAWHASYWLPRASIAAPIGCPGLPAVLRRKWRVGGGR
WAAETLNGAGPGMEAAAAGRQRALLRQVLGWRLAAAVAWSVLLLPVCTAAFVLLSGIQPL
RPLRWLSDSFDDLYTSHVIFCILLMSVVVLVISVFNVEFYAVVPSIPCSRLALIGKIIHP
QQVIHSVAHAIMGMLVAWCAAVMTKGRFQFLAVPCTISESLNDAVPQMCLNEYHLFFLLS
GAFMGYCYSLLYLINNMNYLAFPIIQQYKYLRFRRSLPLLVKHSCVESLYSVRNFCVAYY
FFGYIPKMWISTTMDLRIDSKLHPLDTLSGLLDLSLFYHVWLCGVFLLVTWYIAWLFFKI
YATETHHFPVQPTFAEETDQCLPKILNSNPPLIIKFLALQDLMLLSQYSPVRRQEVFSLS
QPGGHPHNWTAISRECLSLLTDLTQRLIAQQEAAAANGRAKQQVGEMKVSPQTPGAVVAE
DIPFQLQRSNVIPRAAMSSLAKSSLMPLKASPGSDIGSPFSSPALNCKAGILDLSSPWHG
SVQSPLVMRRGPKLWTSGSGLQMNGSHRESFPVLSVARVGSEAVQPSFIYTWLQNKQEQI
KNFLSRRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLP
AILNTLLTLQEVVDRHFKLPHVSSKPPRSSGSLVDTSYKTLRFALRASLKTALYRITTVF
GEHLNAVQVSTEHKKRLQQFLEYKE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcctcgcagtcctccccacgctgtgtgcccgcgccgcttcctgtcggggtggg
cggggagaaggagcgtggcacgcttcctattggctgccgcgggcttccatcgcggctcct
attggctgccccgggcttcccgccgtgttgcgccggaagtggcgtgtgggaggcggccgt
tgggcggcggagactttgaacggcgccgggcccggcatggaggcggcggcggcgggccgg
cagcgggccctgctccgccaggtgctgggctggaggctggcggccgccgtcgcctggtcc
gtgctgctgctgcccgtctgcaccgcggccttcgtcctcctcagcggcattcagcccctg
cgcccgctgcgctggctctctgattctttcgatgacttatatacttcacatgtcatcttc
tgtatccttctgatgtccgtggtggtactggtgatcagcgtcttcaacgttgagttttat
gcagtggtgccatcgatcccatgctctcgattagcactgataggaaagataattcaccct
cagcaagttatccattcagttgctcatgctataatgggcatgttggttgcttggtgtgct
gcagttatgacaaaagggaggttccagtttcttgctgtgccctgcaccatttcagaaagc
ctcaatgatgctgttcctcagatgtgcctaaatgaataccacctcttttttctactttct
ggtgctttcatgggatactgttacagtctcttataccttattaacaatatgaattatttg
gcgtttccaatcatacagcaatacaagtacttacgtttcagaagatctttgcctctcctc
gttaagcacagttgtgtggaatcgctgtactcggttagaaacttctgtgttgcatattac
ttctttggttatatcccaaagatgtggataagtaccacaatggatcttcgtatagacagt
aaattgcatcctcttgacacgctgtctggcttattggatctctccttattttaccacgtc
tggttatgtggtgtgtttcttctggttacctggtacattgcatggttgttcttcaagatc
tatgctacagagacacatcactttcctgttcagccaacttttgctgaggagacggaccaa
tgcctgcctaaaatcttaaacagcaaccctccgctcattatcaagtttttagccttgcaa
gacttgatgttactttcccagtactctcctgttcgacgtcaggaagtctttagcctcagc
cagccaggtgggcacccgcacaactggactgcgatatcaagggagtgtttgagtcttctg
actgatctgacccagaggttgattgcacaacaggaagctgcagcagcaaatgggagagca
aagcagcaagtgggagagatgaaagtatctccgcagactccaggagctgtcgtggcagaa
gatatccctttccagttacagaggtctaatgttattcccagagctgccatgtcttccctg
gctaaatcatccttaatgcctttaaaggcatcgcctgggtctgatattggttcacctttc
agttcacctgctttaaattgcaaagcaggaattctggatttaagctctccttggcatgga
tcagtccaaagtcctcttgtcatgcgaaggggaccaaagctgtggacttcaggttcaggt
ctgcaaatgaatggttcccaccgtgaatccttcccagtgctctctgttgcaagagttggc
agtgaggcagtacagccaagttttatttacacgtggctccagaacaagcaagaacagata
aaaaacttcttatcaagacgagtgctgataatgtatttcttcagcaagcatccggaagcc
tccatccaagctgttttctctgatgcccagatgcacatttgggcactggaaggtctgtct
catttggtagcagcctcctttaccgaagaccaatttggagttgttcaaactacgctgcca
gctatcctgaatacattactgacccttcaggaggttgtagacagacatttcaaactgcct
catgtttctagcaaacctcccaggagttcaggaagcctggtggacacatcctacaaaaca
ctacgatttgcacttagagcatccttgaaaacagcgctgtaccggataaccactgtcttc
ggagaacacttaaatgcagtgcaagtctctacagaacataagaaaagacttcagcagttc
ttggaatataaagaataa
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