Geobacillus sp. GHH01: GHH_c00160
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Entry
GHH_c00160 CDS
T02455
Symbol
pdxS
Name
(GenBank) pyridoxal-5'-phosphate synthase synthase subunit
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh00750
Vitamin B6 metabolism
ggh01100
Metabolic pathways
ggh01240
Biosynthesis of cofactors
Module
ggh_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GHH_c00160 (pdxS)
Enzymes [BR:
ggh01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GHH_c00160 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
IMPDH
IGPS
NMO
TetR_C_27
NanE
FMN_dh
DUF188
DUF2795
Motif
Other DBs
NCBI-ProteinID:
AGE20628
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Position
20297..21181
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AA seq
294 aa
AA seq
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MALTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGVAR
MADPTVIEEVMNAVSIPVMAKVRIGHYVEARVLEALGVDYIDESEVLTPADEEFHIDKRQ
FTVPFVCGCRDLGEAARRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQIRKVVNMSED
ELVAEAKQLGAPVEVLREIKRLGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGIFK
SENPEKYARAIVEATTHYEDYELIAHLSKGLGGAMRGIDIATLLPEHRMQERGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggcattgacaggtacggaccgcgtcaaacgcggcatggcggaaatgcaaaaaggcggc
gtcatcatggacgtcgtgaacgcagaacaggcgaaaatcgctgaagcggcaggggctgtc
gcggttatggcgctcgagcgcgtcccggcggacattcgcgccgctggcggtgtcgcgcgc
atggccgacccgacggtgatcgaagaagtgatgaacgccgtttcgatcccagtcatggcg
aaagtgcggatcggtcactatgttgaggcgcgtgtcttagaggcgcttggtgtcgactac
attgacgaaagcgaagtattaacgccggctgatgaggaattccatattgacaaacggcag
tttaccgttccatttgtgtgcggttgccgcgatttaggggaagcggcgcgccgcattgca
gaaggggcatcgatgttgcgaaccaaaggagagccggggacaggcaacattgttgaggcc
gtgcgccatatgcgcaaagtgaacgcgcaaattcgcaaagtcgtcaacatgagcgaagat
gagcttgtcgctgaggcgaaacagctcggggctccggttgaggtgctgcgcgagatcaag
cggcttggccgcctgccggtcgtcaactttgccgccggcggtgtcgcgacaccggctgac
gctgccttgatgatgcacttgggtgcggacggtgtctttgttgggtctggcattttcaaa
tcggaaaatccggaaaaatacgcgcgcgcgatcgtagaggcgacgactcattacgaagac
tatgaattgatcgcacacttgtcgaaaggattgggcggcgcgatgcgcggcatcgatatc
gcgacattgttgccggagcaccggatgcaagaacgcggctggtaa
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