Geobacillus sp. GHH01: GHH_c00210
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Entry
GHH_c00210 CDS
T02455
Symbol
dnaX
Name
(GenBank) DNA polymerase 3 subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03030
DNA replication
ggh03430
Mismatch repair
ggh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GHH_c00210 (dnaX)
03430 Mismatch repair
GHH_c00210 (dnaX)
03440 Homologous recombination
GHH_c00210 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggh03032
]
GHH_c00210 (dnaX)
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c00210 (dnaX)
Enzymes [BR:
ggh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GHH_c00210 (dnaX)
DNA replication proteins [BR:
ggh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GHH_c00210 (dnaX)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GHH_c00210 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_30
AAA_22
TIP49
RCF1-5-like_lid
AAA_16
AAA_assoc_2
AAA_5
AAA_24
AAA_19
DnaX_C
PIF1
Rad17
AAA_7
AAA_14
DUF815
Mg_chelatase
DUF5789
Motif
Other DBs
NCBI-ProteinID:
AGE20633
UniProt:
L7ZM74
LinkDB
All DBs
Position
25865..27544
Genome browser
AA seq
559 aa
AA seq
DB search
MAYQALYRVFRPQRFADMVGQEHVTKTLQSALLQHKISHAYLFSGPRGTGKTSAAKIFAK
AVNCEQAPAAEPCNECPACLGITNGTVPDVLEIDAASNNRVDEIRDIREKVKFAPTSARY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPATIISRCQRFDFRRIPL
PAIVSRLKYVASAQGVEASDEALSAIARAADGGMRDALSLLDQAISFSDGKLRLDDVLAM
TGAASFAALSSFIEAIHRKDTAAVLQQLETMMAQGKDPHRLVEDLILYYRDLLLYKTAPY
VEGAIQIAVVDEAFTSLSEMIPVSNLYEAIELLNKSQQEMKWTNHPRLLLEVALVKLCHP
SAAAPSLSASELEPLIKRIETLEAELRRLKEQPPAPPSTAAPVKKLSKPMKTGGYKAPVG
RIYELLKQATHEDLALVKGCWADVLDTLKRQHKVSHAALLQESEPVAASASAFVLKFKYE
IHCKMATDPTSSVKENVEAILFELTNRRFEMVAIPEGEWGKIREEFIRNKDAMVEKSEED
PLIAEAKRLFGEELIEIKE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtggcataccaagcgttatatcgcgtgtttcggccgcagcgctttgcggacatggtcggc
caagaacacgtgaccaagacgttgcaaagcgccctgcttcaacataaaatatcgcacgct
tacttattttccggcccgcgcggtacaggaaaaacgagcgcagcgaaaattttcgccaag
gcggtcaactgtgaacaggcgccagcggcggagccatgcaatgagtgtccagcttgcctc
ggcattacgaatggaacggttcccgatgtgctggaaattgacgctgcttccaacaaccgc
gtcgatgaaattcgtgatatccgtgagaaggtgaaatttgcgccgacgtcggcccgctac
aaagtgtatatcatcgacgaggtgcatatgctgtcgatcggtgcgtttaacgcgctgttg
aaaacgttggaggagccgccgaaacacgtcattttcattttggccacgaccgagccgcac
aaaattccggcgacgatcatttcccgctgccaacggttcgattttcgccgcatcccgctt
ccggcgatcgtttcacggctaaagtatgtcgcaagcgcccaaggtgtcgaggcgtccgat
gaggcattgtccgccatcgcccgtgctgcagacggggggatgcgcgatgcgctcagcttg
cttgatcaagccatttcgttcagcgacgggaaacttcggctcgacgacgtgctggcgatg
accggggctgcatcatttgccgccttatcgagcttcatcgaagccatccaccgcaaagat
acagcggcggttcttcagcagttggaaacgatgatggcgcaagggaaagatccgcatcgt
ttggttgaagacttgattttgtactatcgcgatttattgctgtacaaaaccgctccctat
gtggagggagcgattcaaattgctgtcgttgacgaagcgttcacttcactgtcggaaatg
attccggtttccaatttatacgaggccatcgagttgctgaacaaaagccagcaagagatg
aagtggacaaaccacccgcgccttctgttggaagtggcgcttgtgaaactttgccatcca
tcagccgccgccccgtcgctgtcggcttccgagttggaaccgttgataaagcggattgaa
acgctggaggcggaattgcggcgcctgaaggaacaaccgcctgcccctccgtcgaccgcc
gcgccggtgaaaaaactgtccaaaccgatgaaaacggggggatataaagccccggttggc
cgcatttacgagctgttgaaacaggcgacgcatgaagatttagctttggtgaaaggatgc
tgggcggatgtgctcgacacgttgaaacggcagcataaagtgtcgcacgctgccttgctg
caagagagcgagccggttgcagcgagcgcctcagcgtttgtattaaaattcaaatacgaa
atccactgcaaaatggcgaccgatcccacaagttcggtcaaagaaaacgtcgaagcgatt
ttgtttgagctgacaaaccgccgctttgaaatggtagccattccggagggagaatgggga
aaaataagagaagagttcatccgcaataaggacgccatggtggaaaaaagcgaagaagat
ccgttaatcgccgaagcgaagcggctgtttggcgaagagctgatcgaaattaaagaataa
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