Geobacillus sp. GHH01: GHH_c00340
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Entry
GHH_c00340 CDS
T02455
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03030
DNA replication
ggh03430
Mismatch repair
ggh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GHH_c00340 (holB)
03430 Mismatch repair
GHH_c00340 (holB)
03440 Homologous recombination
GHH_c00340 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggh03032
]
GHH_c00340 (holB)
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c00340 (holB)
Enzymes [BR:
ggh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GHH_c00340 (holB)
DNA replication proteins [BR:
ggh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GHH_c00340 (holB)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GHH_c00340 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Motif
Other DBs
NCBI-ProteinID:
AGE20641
LinkDB
All DBs
Position
38366..39358
Genome browser
AA seq
330 aa
AA seq
DB search
MAMRWEQLAKRQPVVAKMLQSGLEKGRISHAYLFEGQRGTGKKAASLLLAKRLFCLSPIG
VSPCLECRNCRRIDSGNHPDVRVISPDGGSIKKEQIEWLQQEFSKTAVESDKKMYIVEHA
DQMTTSAANSLLKFLEEPHPGTVAVLLTEQYHRLLGTIVSRCQVLSFRPLPPAELAQGLV
EEHVPLPLALLAAHLTNSFEEALALAKDSWFAEARTLVLQWYEMLGKPELQLLFFIHDRL
FPHFLESHQLDLGLDLLLYLYRDLLHIQAGQMDGVLYRDQLDRLQRWALACPQRRILAGM
EAILQAKTRLNTTNMSTALLVEQLVLQLKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgatgggaacagctagcgaaacgccagccggtggtggcgaaaatgctgcaa
agcggcttggaaaaagggcggatttctcatgcgtacttgtttgaggggcagcgggggacg
ggcaaaaaagcggccagtttgttgttggcgaaacgtttgttttgtctgtccccaatcgga
gtttccccgtgtctggagtgccgcaactgccggcgcatcgactccggcaaccaccctgac
gtccgggtgatcagcccagacggaggatcaatcaaaaaggaacaaatcgaatggctgcag
caagagttctcgaaaacagcggtcgagtcggataaaaaaatgtacatcgttgagcacgcc
gatcaaatgacgacaagcgctgccaacagccttctgaaatttttggaagagccgcatccg
gggacggtggcggtattgctgactgagcaataccaccgcctgctagggacgatcgtttcc
cgctgtcaagtgctttcgttccggccgttgccgccggcagagctcgcccagggacttgtc
gaggagcacgtgccgttgccgttggcgctgttggctgcccatttgacaaacagcttcgag
gaagcactggcgcttgccaaagatagttggtttgccgaggcgcgaacattagtgctacaa
tggtatgagatgctgggcaagccggagctgcagcttttgtttttcatccacgaccgcttg
tttccgcattttttggaaagccatcagcttgaccttggacttgatttgcttttatattta
taccgcgatttgttgcatattcaagccgggcagatggacggcgtgttataccgcgatcag
ctggaccgcctgcaacgatgggcgcttgcttgcccgcagcggcggattttggctggcatg
gaagcgattttacaagcgaaaacgcgtttaaatacaacgaatatgagcacggcgttgctt
gttgagcagctcgttcttcaattaaagcggtaa
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