Geobacillus sp. GHH01: GHH_c00380
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Entry
GHH_c00380 CDS
T02455
Symbol
yabC
Name
(GenBank) putative 16S rRNA methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggh03009
]
GHH_c00380 (yabC)
Enzymes [BR:
ggh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
GHH_c00380 (yabC)
Ribosome biogenesis [BR:
ggh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GHH_c00380 (yabC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
AGE20645
UniProt:
L7ZSG4
LinkDB
All DBs
Position
41404..42315
Genome browser
AA seq
303 aa
AA seq
DB search
MLWQQKSFTEQTEQGTLYIVPTPIGNLEDMTFRAVRTLQEADVIAAEDTRQTKKLLAHFG
IHTPLVSYHEHNKYASGRQLVEWLKEGKTVALVSDAGMPGISDPGYELIAAALAERCRVV
PLPGANAALTALVASGLPTDRFLFVGFLKRAKKEKKEQLLSLKTAAETLIFYEAPHRLKE
TLALMYDIFGNRRIALGRELTKRFEEFIRGDLSDAVAWAEEHDIRGEFCLIVEGARDGKK
QEQEGEEWWQPLSLVEHVDYYIREHSLSVKEAVKQAASDRNMSKRDVYRQYHQQQEEEKK
EFL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctttggcagcaaaaaagttttaccgaacaaacggagcaagggacgctgtacatcgtg
ccgacgccgatcggcaatttggaggatatgacgtttcgtgcggttaggacgcttcaggaa
gctgatgtcatcgccgccgaggacacaaggcagacgaaaaagctgctcgctcatttcggc
attcatacgccgctcgtcagctaccatgagcataataaatacgcgagcggccggcagctt
gtcgaatggctgaaggaaggaaaaacggtggcattggtgagcgacgccgggatgcccggc
atttccgatccgggctatgagcttattgctgcggcgcttgccgagcgctgccgcgtcgtc
cctcttcctggagcgaacgcggcattgacagcgcttgtcgcctccgggctgcccacggac
cgctttttgtttgtcggctttttgaaacgggcgaaaaaagagaaaaaagagcaactgctg
tcattaaaaacagcggcggagacgttaattttttatgaggcgccccaccgcttgaaagaa
acgctcgctcttatgtatgatatattcggcaatcggcgcatcgctcttggccgcgagttg
acgaaacggtttgaggagttcatccgcggcgatttaagcgatgcggtcgcctgggcggaa
gaacatgacatccggggcgaattttgcctcattgtcgaaggggcgcgagacgggaagaaa
caagagcaagagggagaggaatggtggcagccgctttcgcttgtcgaacatgtcgattat
tatattcgcgagcacagcctttccgtcaaggaggcggtgaaacaggcggccagtgatcga
aatatgtcgaaacgcgacgtttatcggcagtatcatcaacagcaagaagaagaaaaaaaa
gagtttctctga
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integrated database retrieval system
