Geobacillus sp. GHH01: GHH_c01610
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Entry
GHH_c01610 CDS
T02455
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ggh03016
]
GHH_c01610 (truA)
Enzymes [BR:
ggh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GHH_c01610 (truA)
Transfer RNA biogenesis [BR:
ggh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GHH_c01610 (truA)
Prokaryotic type
GHH_c01610 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
HEPN_Toprim_N
Motif
Other DBs
NCBI-ProteinID:
AGE20754
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All DBs
Position
146820..147596
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AA seq
258 aa
AA seq
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MTTRIKCIIAYDGTHFSGYQIQPGKRTVQGEFEEVLRRMHKGTKVRVAASGRTDAGVHAY
GQVIHFDTSLSLSSEQWKKALNAQLPDDIVVRFVQEADADFHARFSAKAKEYRYKVWTAA
ERDVFRRHYCAWHPYSLHISAMNEALGLLHGTHDFTSFCSAKTSIEDRVRTMYRAEVKAD
GPMLEFRFVGSGFLYNMVRIIVGTVLEIGQGKRSPADISMLLAAKDRRLAGPTAPAEGLY
LWRVYYEDECLDHSLADG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgacaacacggatcaaatgcatcattgcctatgatggcacccacttttccggctaccaa
atccagccgggaaagcggacggtgcaaggcgagtttgaggaagtgcttcggcggatgcat
aaagggacaaaagtgcgtgtggcggcttcgggaaggacggatgccggcgttcatgcctat
ggccaagtgatccactttgatacgtcgctttccctttcctcggagcagtggaaaaaggcg
ttgaacgcccagctgccggatgatatcgtcgttcgctttgtacaggaggccgatgcagac
ttccacgcccgtttttcggcgaaagcgaaagaataccgctataaagtatggacggctgcc
gagcgcgacgtgtttcgccgccattattgcgcatggcatccatattcgcttcatatcagc
gcgatgaacgaggcgcttggtttgcttcatggaacgcacgattttacaagcttttgttcc
gccaaaacgtcgatcgaagaccgggtgcgcaccatgtatcgggctgaagtgaaggccgac
ggcccgatgctcgagtttcggtttgtcggcagcggctttttatacaacatggtgcgcatt
atcgttggcacggtgttggagatcggtcaagggaagcgttctcccgccgacatttcgatg
ttgcttgcggcgaaagatcggcgcctcgcgggtccaaccgcgccggccgaagggctgtat
ttatggcgcgtatactatgaggatgaatgtttggaccactcattggcggatggctga
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