Geobacillus sp. GHH01: GHH_c03140
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Entry
GHH_c03140 CDS
T02455
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03420
Nucleotide excision repair
ggh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GHH_c03140 (pcrA)
03430 Mismatch repair
GHH_c03140 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c03140 (pcrA)
Enzymes [BR:
ggh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GHH_c03140 (pcrA)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GHH_c03140 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GHH_c03140 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
Terminase_6N
SUIM_assoc
Motif
Other DBs
NCBI-ProteinID:
AGE20880
LinkDB
All DBs
Position
296326..298503
Genome browser
AA seq
725 aa
AA seq
DB search
MMNFLSEKLLAHLNKEQQEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKQVAPWNI
LAITFTNKAAREMKERVQALLGGAAEDVWISTFHSMCVRMLRRDIDRIGINRNFSILDPT
DQLSVIKAILKDKNIDPKKFEPRTILATISGAKNDLLTPEQFAKRASTYYEKIVGDVYQE
YQQRLLRNHSLDFDDLIMTTIHLFDRVPDVLQYYQYKFQYIHIDEYQDTNRAQYTLVKKL
ADRFQNICAVGDADQSIYRWRGADIRNILSFERDYPNAKVILLEQNYRSTKRILQAANEV
IAHNVNRKPKRLWTENPEGKPIVYYEAMNEVDEAQFVARRIQEAVESGERRYRDFAVLYR
TNAQSRVIEEMFLKANIPYQIVGGLKFYDRKEIKDILAYLRVIANPDDDLSLLRIINVPK
RGIGASTIDKLVRYAAEHELSLFEALGELEMIGFSAKTAGALAAFRGQLEQWTQLQEYVP
VTELVEEVLDQSGYREMLKAERTIEAQSRLENLDEFLSVTKHFENVSDDKSLVAFLTDLA
LISDLDELNGTDQAAEGDAVVFMTLHAAKGLEFPVVFLIGMEEGIFPHLRSLENEDEMEE
ERRLAYVGITRAEEELVLTNAQMRTLFGNIQMNRPSRFLDEIPAHLLETVSRGKPSVSRS
ASARLQAGGAIRVWKVGDRANHRKWGIGTVVSVRGEGDDQELDIAFPSPIGIKRLLAKFA
PIEKV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattttttatcggaaaagctgcttgcgcatttaaacaaagagcagcaagaagcc
gttaaaacgacagaaggcccattgctcatcatggcgggagcgggcagcggaaaaacgcgc
gtgctgacgcaccggatcgcctatttgatggcggaaaaacaggtggcgccgtggaatatt
ttagccattacgtttacgaacaaagcggcgcgtgaaatgaaggagcgggtgcaggcgctc
ttaggcggggcggcggaagacgtgtggatttcgacgttccattcgatgtgcgtccgcatg
ttgcgccgcgacattgaccgcatcggcatcaatcgcaatttttccatccttgacccgacg
gatcagctttcggtcatcaaagcgattttgaaagacaaaaatatcgatccgaaaaaattt
gagccgcggacgattttagcgacgatcagcggggcgaaaaacgatttgctcacgcccgag
caattcgcaaagcgggcatcgacgtactacgaaaagatcgtcggcgacgtgtatcaagag
tatcaacagcgccttctccgcaatcattcactcgatttcgacgatttgatcatgacgacg
atccacttgtttgaccgcgtgccggatgtgcttcaatattaccagtataagttccagtac
atccatatcgatgagtaccaggatacgaaccgcgctcaatatacgctggtgaaaaagctc
gcagaccggtttcaaaatatttgcgccgtcggcgatgccgaccagtcgatttaccggtgg
cgcggggcggacattcgcaatattttatcgtttgagcgcgactacccgaacgcgaaagtc
attttgcttgaacaaaactaccgctcgacgaaacgcattttgcaggcggcaaatgaagtc
attgcgcataacgtcaatcgaaaaccaaagcggttgtggacggaaaacccggaagggaag
ccaatcgtctattatgaagcgatgaacgaagtggacgaagcgcaatttgtcgcccgccgc
attcaagaggcggttgagagcggggagcgccgctaccgcgattttgccgtgctttatcgg
acgaacgcccagtcgcgcgtcatcgaggaaatgtttttaaaagcgaacattccgtaccaa
atcgtcggcggcttaaagttctatgaccggaaagaaattaaagacattctcgcttacttg
cgcgtcatcgccaaccccgatgacgatttgagcttgcttcgcatcatcaacgtgccaaag
cgtggcatcggcgcctctacgatcgacaaacttgtccgctatgcggccgagcatgagctg
tccttgtttgaagcgctcggcgagctggagatgatcggcttcagcgcgaagacggccggg
gcgctcgccgcgtttcgcggacagcttgagcaatggacgcagctgcaagaatacgttccg
gtgacggaacttgtggaggaagtgctcgaccaatcgggctaccgcgagatgctcaaggcg
gaacggacgattgaagcgcaaagccggcttgagaacttggacgagtttttgtcggtgacg
aagcatttcgaaaatgtaagcgacgataaatcgctcgtcgcctttttaaccgacttggcg
ctcatttctgatttggacgagctgaatgggacagatcaggcggccgagggcgatgccgtc
gtcttcatgacgctgcacgccgccaaagggcttgagtttccggtcgtgtttttgattggc
atggaagaaggcatttttccgcatcttcgttcactggagaatgaggatgaaatggaagaa
gagcggcggctggcgtatgtcggcatcactcgggccgaggaagagctcgtattgacgaac
gcgcaaatgcggacgctgtttggcaacatccaaatgaaccggccgtcgcgctttttagat
gagattcccgcgcatttgctggagacggtctcgcgtgggaaaccgtctgtttcccgttca
gcgtccgctcgcttgcaggcaggcggcgccatcagggtgtggaaagtcggagaccgggcg
aaccatcggaaatggggaatcggtacggttgtcagtgtccgtggcgaaggtgacgaccaa
gaactcgatatcgccttcccgagcccgatcggcattaaacgtctgctcgctaaatttgcg
ccgattgagaaagtatag
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