Geobacillus sp. GHH01: GHH_c04450
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Entry
GHH_c04450 CDS
T02455
Symbol
yfjP
Name
(GenBank) putative DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GHH_c04450 (yfjP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c04450 (yfjP)
Enzymes [BR:
ggh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GHH_c04450 (yfjP)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GHH_c04450 (yfjP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AGE21010
UniProt:
L7ZTL4
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All DBs
Position
447706..448572
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AA seq
288 aa
AA seq
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MWKRTITVPAPYDFAHALERLALDPLLAVDLERRRITVPLHLDGLKVPVVIESIGTKDDP
RFVVSAPHPKRQEDIIERVSHLFQWRTPLVLVYDHFRATELAPLFAEYEGLPLVLDFDLY
FCLMKCLIHQQLHLKVGYRLTERFVKAFGEERDGVWFYPRPEEVAARSYDDLRALQLSGR
KAEYIVDVSRLIAEGKLRLDELEQMEDGEVMERLTAVRGIGPWTVQNFLLFGLGRPNVFP
PADIGLQRAVEKWFGLPKRPTVKEMAALSERWKPYASYAALYLWRSIE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaacgaacgatcactgtgccggcgccgtatgatttcgcccacgcgcttgaacgg
cttgcattggatccgctcctggcggtcgatttagagcggcggcgcatcaccgtgccgctt
catctcgatggtttaaaggtgccggtcgtgattgaaagcatcggcacaaaagacgatcct
cgctttgtcgtctcggcgccgcatcccaagcggcaggaagacatcatcgagcgcgtctct
catttatttcaatggcggacgccgctcgttctggtgtatgatcattttcgcgcgaccgag
ctggcgccgctgtttgccgagtatgaggggctgccgcttgtgctcgattttgacttgtat
ttttgcctaatgaaatgtttgatccaccagcagcttcatcttaaagtcggttaccggctc
acagagcggtttgtgaaagcgtttggcgaggagcgggacggcgtttggttttacccgcgc
ccggaagaagtggccgcccgttcgtacgatgacttgcgcgccttgcagctgagcgggcgg
aaagccgaatatatcgtcgatgtgtcgcgcctcattgccgaggggaagctgcggcttgat
gaactcgagcagatggaagacggcgaggtgatggagaggttgaccgccgtgcgcggcatc
ggtccgtggaccgtgcaaaatttcctcctcttcggcctcggccgtccgaacgtctttccg
ccggcggatatcggtttgcagcgggcggtcgaaaaatggttcgggcttccgaagcggcca
actgtcaaagagatggcggcgcttagcgagcggtggaagccgtacgccagctatgcggcg
ctttatttatggagaagtatcgaatga
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