Geobacillus sp. GHH01: GHH_c05450
Help
Entry
GHH_c05450 CDS
T02455
Symbol
yhcT
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ggh03009
]
GHH_c05450 (yhcT)
Enzymes [BR:
ggh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GHH_c05450 (yhcT)
Ribosome biogenesis [BR:
ggh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GHH_c05450 (yhcT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
RluD_N
Motif
Other DBs
NCBI-ProteinID:
AGE21086
LinkDB
All DBs
Position
complement(531872..532771)
Genome browser
AA seq
299 aa
AA seq
DB search
MWTRKGDWLECIIPSWWSGLTIEQLLKDVWAASKKLAHRWRMEHGVKLNGQAVPWKTVLN
ERDRLQLYAYEPEPSFIVPEYRELSILWEDDHLLVLNKEAGIDIHPSEPGQTGTLANAVA
FYLQSQAILTKVRHIHRLDRDTSGAILFAKHPLAGATLDRMLAHRAIKRTYVALVHGRLS
PKSGTISAPIGRDRHHPTRRRVSKTGAKAVTHYRVIKTFPSASLVELSLETGRTHQIRVH
LAHLGHPLVGDVLYGGQPVFHRHALHAAKLTFRHPFTTEEVICFAPTSDFPTDLSRIYN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgtggacaagaaaaggcgattggctggaatgcatcatccctagctggtggagcggtttg
acgattgaacagctcctgaaagacgtatgggccgcctcgaaaaagctcgcccaccgttgg
cggatggaacacggcgtcaaactgaacggccaggctgttccctggaagacggtgctcaac
gaacgcgaccggcttcagctttacgcatatgagccagagccgtcgttcatcgttccagaa
tatcgggaactttcgattttatgggaggacgaccatctgctcgtcttgaacaaagaagcc
ggcatcgacattcatccgtccgaaccggggcaaaccggcacgctcgccaatgcggtcgcg
ttttatttgcagtcgcaggcaattttaacaaaagtgcgccacattcaccgacttgaccgc
gacacgtcgggagcgattttatttgccaaacacccgcttgccggtgcgacgctcgatcgg
atgctcgcccaccgtgccatcaagcggacgtacgtcgcccttgttcacggtcgtttgtcc
ccgaaatcaggaaccatttccgcgccaatcggccgcgaccgccatcatccgacgcgccgg
cgcgtctcgaagacgggggcaaaagcggtgacacactatcgcgtcatcaaaacattcccg
tcagcatcgcttgtcgagctttctctcgagaccggacggacgcaccaaatccgcgtccat
ttggcccatctcggccatccgcttgtcggcgatgtgctttatggcggccagccagtgttt
catcgccatgcgcttcatgccgccaaactaacgttccgccatccgtttacaactgaagaa
gtcatttgtttcgcgccaacaagcgattttcccaccgacctttcgcgcatttacaattga
DBGET
integrated database retrieval system
