Geobacillus sp. GHH01: GHH_c05980
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Entry
GHH_c05980 CDS
T02455
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggh03019
]
GHH_c05980 (yhaM)
Messenger RNA biogenesis [BR:
ggh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GHH_c05980 (yhaM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGE21139
UniProt:
L7ZVL6
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All DBs
Position
579577..580554
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AA seq
325 aa
AA seq
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MAKGIIHYEVGEQVDLFLLIKSATKGIASNGKPFLTLILQDKSGDIEAKLWDVSPDDEER
YVPECIVKVAGDIHNYRGKLQLRIRSIRPAHPGDAVRIDDFLETAPLGREEMKAKVMEYI
FAMENPNIQRITRYLLKKYEKAFFEYPAATKNHHEFISGLAYHVVSMLELAKALIHLYPS
LNKDLLYAGVILHDLGKVMELSGPVSAAYTLEGNLLGHISIMVSEISKAAEQLGIQGEEV
VILQHLVLAHHGKAEWGSPKPPLVKEAEVLHYIDNLDAKITMIDRALEKVKPGEFTERVF
ALDNRSFYKPAFLSVSKPKNAGSKE
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaaggcatcatccattatgaggttggggaacaagttgatctctttttgctcatc
aaatccgcaacgaaaggcatcgccagcaacggcaagccgttcttaacgttgattttgcaa
gataaaagcggcgacattgaagccaaactgtgggatgtctcgccggatgacgaagagcgg
tatgtgccggagtgcatcgtcaaagtggcgggagacatccataactaccgcggcaaattg
cagctgcgcatccgttcgatccgtcctgctcatccgggcgatgcggtgcgcatcgatgac
tttttggagacggctccgctcggccgcgaggaaatgaaggcgaaagtcatggaatacata
tttgcgatggaaaatccaaacatccagcgcattacccgctatttgttgaaaaaatacgaa
aaggcgttttttgagtacccagcggcgacgaaaaaccatcatgaattcatctccggactg
gcgtaccacgtcgtgtcgatgctcgagctcgccaaggcgctcatccatctctatccgtcg
ctcaataaagatttgctttatgccggcgtcattttgcatgaccttggcaaagtgatggaa
ttatccggtccggtatcggcggcgtatacgcttgaaggaaatttgctcggacacatttcg
atcatggtgagcgagatcagcaaggcggcggaacagctcggcattcaaggtgaagaagtc
gtcattttgcagcatcttgtgctcgcgcatcatggcaaggcggaatggggcagcccgaag
ccgccgcttgtcaaagaagccgaggtacttcattacattgacaatttggatgcgaaaatt
acgatgatcgaccgtgcgcttgagaaagtaaaaccaggtgaattcactgaacgcgtcttt
gcccttgacaaccgctcgttttacaaaccggcgtttttgtctgtttcaaagccaaaaaac
gcgggtagtaaagagtag
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