Geobacillus sp. GHH01: GHH_c06360
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Entry
GHH_c06360 CDS
T02455
Symbol
sbcD
Name
(GenBank) DNA exonuclease subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c06360 (sbcD)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GHH_c06360 (sbcD)
Archaeal homologous recombinant proteins
GHH_c06360 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
CobU
Motif
Other DBs
NCBI-ProteinID:
AGE21177
UniProt:
L7ZVV3
LinkDB
All DBs
Position
617033..618211
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AA seq
392 aa
AA seq
DB search
MRILHTADWHFGRTLEGRSRMAEQEAFVDELVEIVKKEQIDIILVAGDVFDSVNPPAAAE
QLFYESLARLSDKGRRPVAVISGNHDHPDRISAARTLMCAHNIFLFGRPQAAVCRIDVPS
CGETMMLAPLAYPSESRLAELLSSDCKETTMRDRYDDRIRALLAAMAASFTAETVNIAMS
HLYVAGGRTSDSERPIEVGGAYTVAAESLPKAAQYVALGHLHRPQDVKQAKTAARYSGSP
LAYSFSEAGQAKSVTVVDVHPGGAAKVAEIPLVAGKPLIRWKATEGLAQVYRWCEEGRDR
SSWIDLEIHVTESLTMEEIDRLRKLHPGFVHIRPVLPNRVEEMMEMSREPLSLEEMFHRF
YERQTGGQTPDEELVRLFLELAAEEEKEGEGE
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttgcataccgcggactggcattttgggagaacgctcgaggggaggagtcgg
atggccgagcaagaggcatttgttgatgagcttgtggagattgtcaagaaagaacaaatt
gacatcatccttgtggccggcgacgtattcgactccgtcaacccgccggcggctgcggaa
caactgttttatgaaagcctcgcccgcttgtccgacaaaggacgccgcccggtggcagtc
atcagcggcaaccacgaccaccccgaccggatcagcgctgcccggacgttgatgtgtgcg
cacaacatttttcttttcggccgcccgcaagcggctgtttgccggattgacgttccatcg
tgcggcgaaacgatgatgcttgctccgttggcctatccgtccgaatcgcgcctcgccgag
ctgttgtcatccgactgtaaagagacgacgatgcgcgatcggtacgatgaccgcatccgc
gccctattagcggcgatggccgcctcgttcacggcggagaccgtcaatatcgcgatgagc
catctttacgttgccggcggacgtacgtccgattccgagcggccgattgaagtcggcggc
gcttatacggtggcggctgagagcttgccgaaagccgcgcaatatgtggcgcttggccat
ctgcaccggccgcaggatgtcaagcaggcaaagacggcggcgcgctattccggctcgccg
ttggcgtacagcttttccgaagccggtcaagccaaatcggtcacggtcgttgacgtgcat
ccaggcggggcggccaaggtggcggagataccgctcgttgccggcaaaccgctcatccgt
tggaaggcgacagaggggctcgctcaagtataccgctggtgtgaggaaggaagagaccga
tcaagctggatcgatttggagattcatgtgaccgagtcgttgacaatggaagaaattgat
cggctgcgtaagcttcatcccggatttgtccacattcgcccggtgcttcccaatcgggtg
gaagagatgatggaaatgagccgcgagccgctttcacttgaagaaatgtttcaccgcttt
tacgaacggcagactgggggacaaacgccggatgaagagctcgtccgcctctttttggag
ctggcggcggaagaagagaaggaaggggagggagaatga
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