Geobacillus sp. GHH01: GHH_c06370
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Entry
GHH_c06370 CDS
T02455
Symbol
sbcC
Name
(GenBank) DNA exonuclease subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c06370 (sbcC)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GHH_c06370 (sbcC)
Archaeal homologous recombinant proteins
GHH_c06370 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
SMC_N
AAA_23
AAA_29
AAA_21
ABC_tran
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AGE21178
UniProt:
L7ZNQ7
LinkDB
All DBs
Position
618208..621552
Genome browser
AA seq
1114 aa
AA seq
DB search
MKPISLTIAGLHSFREKQTIDFTALCEGGVFGIFGPTGSGKSTILDAMTLALFGSVERAA
NRTQAIINHAEQELFVSFTFELENAAGAKRYTVERSLKKVDEWRTRSAVCRLIEHRSEPV
VLADKLSEVDKAIEQLLGLTMEDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLERYG
DQLNKKLKDRLAAARQEWEKIEAEKAGLGDASKAALEQAEADVRELAGLFAKRKKELEEV
EADVERTKQRWAWQQEKEAVEQELAALRQHESAIRELEAKKERAEQAERIWPYWEQCEQA
CRLRAEAFRRYEGLARRLEEAQLSYEEAARRYERARQEKAQREPELLVQMERLRQAAQLE
QQMEVLGQELAALREERKRLIAQEKAAARRFEEASVWYERGAKRQRELKEELKQHEEALD
GKDEAERAYRQKQHIEQAASAIARVDAQLQQKEAVWRRAKEEKLERERRSAAVGSRLQEL
FRRVERTYRFVCWRQQDAEKQLYTLQKTMEAERQRAEEARTAQLASALAERLRPGEPCPV
CGSREHPHPAAAPHDVQLERLSELEAERQRYEQDWQMIISFKAQLEQLAELAAGHEAPPV
FAESRSVEEVVDLTVEVRALAQDVIELKEAAYRVLAQWNEAESARREAEKACQWIAADIE
ALQVEKQRLEEERRQLEQQWRQMYPFHSLETIDAVYEQLCELENVRRDVQKRLEDSVLFL
EEKQRAKEEAAKERSRLETERVRLDSLISAKQQQWNEYERQRGEKAGEGPAAVQLQKAED
EWRQLQNGEQQAYEAWQRAQREYQMLESETKAAKQAWEEGVRREEEALARWRGALLDTMF
ADAEQVKQAKAEKAQRDEWDEAIRRYWRQIGQAEHRLAQLAAAIGGATVSAEQWETMQRV
YAELKGQVEAMTQQLGAAQAKVEELRKKHSRFVELEEKQTELSRRIERYKQLQALLRGNS
FVEFMAEEQLEQVTAMASERLQRLTRHRYSLELDSQGGFLIRDDANGGVRRPVSTLSGGE
TFLTSLSLALALSAQIQLRGEYPLRFFFLDEGFGTLDAELLETVISALEKLHTERLAVGV
ISHVQEIRHRLPRRLIVEPAEPSGRGTHVWLEMM
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgatctcgctgacgatcgccgggcttcatagctttcgtgaaaagcagacgatc
gatttcaccgcactgtgtgagggcggtgtgttcggcattttcgggccgactggaagcggc
aaatcaacgattttagacgccatgacgctcgccttgttcggcagcgtcgagcgggcggcc
aaccgcacgcaggcgatcatcaaccacgcggagcaagagttgtttgtctcgtttacgttt
gagctggaaaatgcggcaggagcgaaacggtatacagtcgaacgaagcttaaaaaaagtg
gacgaatggcggacgcgcagcgccgtttgccgcctgatcgagcatcggtccgagccggtc
gtgctcgccgataaactgtcggaggtggacaaggcgatcgagcaattgctcggcttgacg
atggaggatttcacccgggcggtcgtcttgccgcaaggaaaatttgccgaatttttatcg
ctcaaagggtcggagcggcggcaaatgctgcagcgcctcttccatcttgagcggtatggc
gatcagttgaataaaaagttgaaagaccggcttgccgccgctcggcaagaatgggaaaaa
atcgaagcggaaaaagcggggcttggcgatgcttcaaaagcagcgctcgagcaggcagag
gcggatgtgcgggagctcgcggggctgtttgccaagcgaaaaaaagagcttgaggaagtc
gaagcagatgtggaacgaacaaaacaacgatgggcgtggcagcaagaaaaagaagcggtc
gaacaagagctcgccgcgctgcgccaacatgaatccgccatccgcgagcttgaggcgaaa
aaggagcgcgccgagcaagcagagcgcatctggccgtattgggagcagtgcgagcaggca
tgtcgcttgcgggcagaggcgtttcgtcggtatgaaggactggcgcgtcggttagaagaa
gcccaattgagctatgaagaagcggcgcggcgttatgaacgggcgcgccaagaaaaggcg
cagcgcgaaccggaattgctcgtccagatggaacggctgcggcaggcggcgcagcttgag
cagcaaatggaagtgcttggacaggagctcgcagctcttcgtgaagagaggaagcgactc
attgcccaggagaaggcagctgcacgccggtttgaagaggcgtcggtctggtatgagcgc
ggcgcgaagcggcagcgggagttgaaagaagaactgaaacagcatgaagaggcgctggat
ggaaaagatgaggcagagcgggcgtacaggcagaagcagcatattgagcaagcggcgtca
gccatcgctcgcgtcgatgcccaacttcagcaaaaggaggccgtttggcgtcgggcgaaa
gaggaaaagttggagcgggaacgccgatcagccgctgtcggctcccggcttcaagagctg
ttccggcgtgtggagcggacgtatcgtttcgtctgctggcggcagcaggacgctgaaaaa
caattgtatacgttgcagaaaaccatggaggcggagcgacagcgagccgaagaagcgcgg
acggcgcaactcgcctccgccttggctgagcggctccgtcccggcgagccgtgtccagtg
tgcggatcgcgcgagcatccgcatccggccgccgcaccgcacgatgtccaacttgagcgt
ctgtccgagcttgaggcagagcggcagcggtatgaacaagattggcaaatgatcatttcg
ttcaaggcgcagctcgagcagcttgccgagctggcggcaggccatgaagcgccgcctgtg
tttgccgaaagccgatcggtggaggaggtcgtcgacctcactgtggaagtgcgggcgctt
gcgcaagatgtcattgaattgaaagaagcggcctaccgggtgcttgcccaatggaatgaa
gccgagtcagcgcggcgcgaagcggagaaagcgtgccaatggatagcggcggacatcgaa
gcgctgcaagttgaaaagcagcggctggaggaagagcggcggcaacttgaacagcaatgg
cggcagatgtatcctttccattcgcttgagacgatcgatgcggtgtatgaacagctgtgt
gaactggaaaacgtgcggcgcgacgtgcaaaaacggctggaggacagcgtgctgttttta
gaggaaaaacagcgggcgaaagaggaagcggccaaagagcggagccggcttgagacggag
cgggtgcgtcttgactcgctgattagtgccaaacagcagcaatggaacgaatatgagcgg
caacggggcgagaaggcgggggaaggtcctgcggccgtgcagcttcagaaggcggaggac
gaatggcgccagctgcaaaacggcgagcaacaggcgtatgaggcctggcagcgagcccag
cgggaatatcaaatgcttgaaagcgaaacaaaagcagccaagcaggcgtgggaagaaggc
gtccgccgcgaagaagaggcgctcgctcgctggcgcggcgcgcttttggacaccatgttt
gccgatgccgaacaagtcaagcaagcaaaggcggaaaaagcgcagcgagatgaatgggat
gaggcaatccgccgctattggcgccaaatcgggcaagccgaacatcgcctcgcccagctg
gccgccgccatcgggggggcgacggtgagcgctgaacaatgggagacgatgcagcgtgta
tacgccgagttgaaggggcaagtggaggcgatgacgcagcagcttggggcggctcaagcg
aaggtggaagagttgagaaaaaaacatagccgctttgttgaactggaggagaagcagacg
gagctcagccggcgcatcgagcggtataaacagctgcaggcgctgcttcgcggcaacagc
tttgtcgaatttatggctgaagagcagctcgagcaagtcaccgccatggcttcggaacgg
ctgcagcggctgacacggcaccggtattcgctcgaattggattcgcaaggcgggtttctg
atccgcgatgatgccaatggcggcgtcagacggccggtatcgacgctctcgggtggggag
acatttttgacgtcactgtcgttggcgttggcgttatcggcgcaaattcagctgcgcggc
gagtatccgctccgctttttcttcttggacgaagggtttggcaccctcgatgctgagctg
cttgagacggtcatttccgccttggaaaagctgcataccgagcggctggcggtcggcgtc
atcagtcatgtacaagaaattcgccaccgtctgccgcgacggctcatcgtcgaaccggct
gaaccgtccggacgcggcacgcacgtctggctggaaatgatgtga
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