Geobacillus sp. GHH01: GHH_c14130
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Entry
GHH_c14130 CDS
T02455
Name
(GenBank) hypothetical protein
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GHH_c14130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggh03032
]
GHH_c14130
Enzymes [BR:
ggh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GHH_c14130
DNA replication proteins [BR:
ggh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
GHH_c14130
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
GHH_c14130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
PDDEXK_1
UvrD-helicase
PhoH
DEAD
UvrD_C_2
SLFN-g3_helicase
AAA_22
AAA
HAUS5
AAA_16
ResIII
AAA_24
cobW
Motif
Other DBs
NCBI-ProteinID:
AGE21946
UniProt:
L7ZYX5
LinkDB
All DBs
Position
1415486..1419247
Genome browser
AA seq
1253 aa
AA seq
DB search
MLYVSPAKIASYFYHECERNFYFQSLAKERRSELDVPEELFEQPAVHESVLRRGVEWEEE
VITTYLAGQVQMGKREPGAPISHCYLDGEETIRELKQPSKRYLYQPTLIAPPRFYERYGL
DLKVIRFAACRPDLIECIPGQNGFVFRIIDIKSSDVLKISHRVQTALYALMLSSVLEEHG
VKGSVDLREAGIWTYKTEQPQLTDIGQLLPFLEQFLASELTALAGKQLDELFWHLDYRCE
WCPFYDYCFDKARKQSHISLVPYLSSHASRFIRERQLPETIDEFRQLLERQETRHVLKQN
AGLARQLRRLEAQLEAIAEEKVVPYDQAVTHMPIWEDIRLILTAQRDPLTGKIAAASLYR
VGGTDVFGTGSEMHHVIAGSLEECDAVGRTFADALDRLLQTVHDYNRAREWRAQKSVQAY
VADNYEWDNVQQLLQALLFDPDYNEKAVRLLSYFHSSSLASANDHPDEIVPLPVVVLTTA
VSQLFALPTHVAYRLEDLSRYIAAYHDSPFLYSASERFSFRLTNAMKLDVLHDAWQTGDM
EKRQAVEKELSCRLWAAHSIIQGIRAWAESVHPSPLMVWPEKFAFPHSADYRDPLVSKLA
FMARYEALLNYLDIRQKRLLPLSERLENGVTLHVTYLGGDRFRLNNRQALETIDLKASWL
LTECNEEGEKAQQTFPDHKYASEWKPPQWANVYFVRIRAIEDNGKTAELKLELPKWLDRF
PLVEGEEYWLSLRHADFTTPRVLQALQQLDKDNHRILDLIRDPIRYRKTFRPNWDAEEVK
ALLRQSRLTKSQRQAFLHFLRHTLTLVWGPPGTGKTHFIAVALRLLMEMYEKRGRRLAIL
VSGFTHAAIENVLRKIQELAPRRSVHIAKLGEIQTENAKGIAEVADRDLLGWFGSGGHRV
LGATLYGIQRAYEKGYLEEFDVVILDEASQIRVADSLLALRHVKKAGRLLIVGDHFQLPP
IIQGTYAAAEGEPHLFDSIFHLLFDADVEKRYTRQLTDNFRMNEALCRYPAERIYGRDYT
AFNRQIAEQTLALVDAPTADEWVEAAIDPDYPLVVCIYDGAHGTQENEAEARWVAGIAKV
LRARLLDSEGKRYDDSSEGDQAFWRRGLFIISPHRAQIRAIRRALEHQRLRPPFFVDTVD
KMQGQEADAAIISYGVADPELAVMEGEFIYSLNRLNVSLTRARKKTILFLSRQLMSPSLQ
VIGNEEYREGVNFMLGLEHYASRRGETQTFMVDGVALRMYRVSCPKMEKMDTL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgctttacgtttctcctgccaaaatcgcaagctatttttatcacgagtgcgagcggaat
ttttattttcagtcgttggcgaaagaacggcgcagcgagctcgatgtgccggaagagctg
tttgagcagcctgcggttcatgagagcgtgctgcgccgaggggttgagtgggaagaggaa
gtgattacgacctatttggccggccaagtgcagatggggaagcgagagcctggcgcaccg
atttcccactgctatttggatggagaggagacgatccgcgagctgaagcagccgagcaag
cgctatttataccagccgacattgatcgcgccgccgcgcttttacgaacggtacgggttg
gatctgaaagtgatccgatttgcggcgtgtcgtccggatttgattgagtgcattccgggg
caaaacggctttgtgttccgcatcatcgacatcaaatcatcagatgtgttaaagatttcc
caccgcgtgcaaacggcgctgtacgcgttgatgttgtcctcggtgttagaggagcacggt
gttaagggcagcgtcgatttgcgcgaagccgggatatggacgtacaaaaccgagcagccg
cagctgacagatatcggacagctgcttccgtttcttgagcagtttttggctagcgaattg
acggcgctggctgggaagcaacttgatgagctgttttggcatttggattatcgctgtgaa
tggtgcccgttctatgattactgtttcgacaaagcgcggaaacagtcgcatatttccctc
gttccgtacttatcgagtcatgcgtcccgctttatccgcgagcggcagcttccggagacg
atcgatgagtttcgccaacttcttgagcgtcaagaaacgagacacgtcctaaaacaaaac
gctggattggcgcgtcaacttcggcggcttgaagcgcagcttgaggcgattgcggaggaa
aaggtcgttccgtatgaccaggcggtgacgcatatgccgatatgggaagacatccgtctg
attctcaccgcgcaacgcgatccgttgacggggaagattgcggcggcatcgttgtaccgt
gttggtggaacagatgtgtttggaacgggatcggaaatgcatcatgttattgctggttct
ctggaagaatgcgacgcggtcggccgaacgtttgccgatgcgctggaccgcctgcttcag
acggtgcacgattacaaccgagcgcgagagtggcgggcgcaaaaatcggtgcaggcgtat
gtcgccgacaactatgaatgggacaatgtgcagcagctgcttcaagcgcttttgttcgat
ccagactataacgaaaaagctgttcggctgctgtcgtattttcatagcagctcactagca
agtgccaacgatcatccagatgaaatcgttccgcttcctgtcgttgttctgacaacggcc
gtgagccagctgttcgccttgccgacgcatgttgcgtaccgtcttgaagacttgtcgcgg
tatattgcggcctaccatgattcgccgtttctgtactcggcgagcgagcgcttttcgttc
cgcttgacaaacgccatgaaactggatgtgctgcatgatgcctggcaaacaggggacatg
gaaaaacgacaagcggtcgagaaggagctgagctgccgcctttgggccgctcacagcatc
attcaaggcatccgtgcgtgggccgagagcgtccatccttcgccgcttatggtctggccg
gaaaaatttgcgtttcctcattcggctgattaccgtgatccgcttgtgtccaagctggcg
tttatggcgcgctacgaggcgctattaaactacttggatattcgccaaaagcgcctgctc
ccgctttcggagcggcttgagaacggagtgacgcttcatgtcacgtaccttggcggcgat
cggttccgattgaacaaccgccaggcgcttgaaacgatcgatctaaaggcgagctggctt
ttgacggagtgcaatgaggaaggagaaaaggcgcaacagacgtttcctgatcataagtac
gccagtgaatggaagccgccccaatgggccaatgtctattttgtccgcattcgcgccatc
gaagataatggcaagacagctgaactcaagctcgagttgcccaaatggctcgatcggttc
ccgcttgtggaaggagaggagtattggctgtcgcttcggcatgcggattttaccaccccg
cgcgtcttgcaggcgttgcaacagttggataaggacaatcatcgcatcttggacttgatt
cgcgatccgattcgctatcggaaaacgtttcgtcccaactgggatgcagaggaagtcaag
gcgcttctccgccaaagcaggctgacgaaaagccagcgtcaggcgtttctccactttctc
cgccatacgttgacgctcgtctgggggccgcctggcaccgggaaaacgcattttattgcc
gttgctcttcggttgctgatggaaatgtatgaaaaacgggggcgaaggcttgccattctt
gtttcgggtttcacccatgcggcgatcgaaaacgttctgcgcaaaattcaggagcttgcg
ccgcggcgcagcgtccatatcgcgaaacttggtgagattcagacggaaaacgccaaagga
atcgccgaggtggcggaccgtgaccttctcggatggtttggcagcggcggccatcgggtg
cttggcgccacgctgtacggcattcaaagggcgtatgaaaagggctatctagaagagttt
gacgtcgtcattctggatgaggcgtcgcaaatccgcgtggccgattcactgttggcgttg
cgccatgtcaaaaaagcaggcaggctgcttatcgtcggcgaccatttccagctgccgcca
atcattcaagggacgtatgcggccgcggaaggggaaccgcacctgttcgactcgattttc
cacctgttgtttgacgccgatgtcgagaagcggtatacccgccaactgacggacaatttc
cgcatgaacgaggcgctttgccgctacccggccgagcggatttatggacgtgactataca
gcgttcaaccgccaaattgccgagcaaacattggcgctcgtcgacgctccaactgccgat
gaatgggtggaagcggcgatcgaccccgattatccgcttgttgtttgcatttatgatggt
gcgcacggcacgcaagaaaatgaggccgaagcgcgctgggtggcgggcatcgcgaaggtg
ttgcgggcacggcttctcgacagcgaggggaaacggtacgatgactcatcagaaggcgac
caagcgttttggcgccgcgggctgtttatcatctcgccgcatcgggcgcaaatccgcgcc
atccgccgtgcccttgaacaccaacgattgcgcccgccgtttttcgtcgatacggttgat
aaaatgcaagggcaagaggcggatgcggcgatcattagctacggcgtcgccgaccctgaa
ctggctgtgatggaaggggagttcatctacagtttgaaccgcctcaacgtttcgcttaca
cgggcgcggaaaaagacgatcctcttcctctcgcgccaactgatgtcgccgtcgcttcag
gtgatcggcaacgaggaataccgtgaaggagtgaattttatgctcgggctcgagcactac
gcttcacggcgtggggaaacgcaaacgtttatggtcgacggtgtcgcgctgcgaatgtac
cgagtcagttgtccaaagatggaaaagatggacactctatga
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