Geobacillus sp. GHH01: GHH_c23740
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Entry
GHH_c23740 CDS
T02455
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh00550
Peptidoglycan biosynthesis
ggh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GHH_c23740 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ggh01002
]
GHH_c23740 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ggh01011
]
GHH_c23740 (dacB)
Enzymes [BR:
ggh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GHH_c23740 (dacB)
Peptidases and inhibitors [BR:
ggh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
GHH_c23740 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ggh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
GHH_c23740 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Motif
Other DBs
NCBI-ProteinID:
AGE22885
LinkDB
All DBs
Position
complement(2379266..2380648)
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AA seq
460 aa
AA seq
DB search
MRPAQAPERIVQGCLPLQRHFFIIFVPSTHTLVQNAALGFSLFPPRRFFGCGPFSLIGKE
EQAIPPRSLKEGDPRRYEMNKQKRLIALILALAAGIMAFVPERMRAMDGVSAKSAILIEQ
HSGRVLFAKDAYTKRRIASITKIMTAILAIESGKMDDTVTVSARAVRTEGSSIYLRQGEK
IKLRDLVYGLMLRSGNDAAVAIAEHVGGSVEGFVFLMNQKAAEIGMRDTEFANPHGLDDA
ENHYSTAYDMALLMQYAMKNKEFRRISGTKVYRAPAPPGEDGARVWRNKNKLLTSLYEYC
TGGKTGYTKRAHRTLVTTASKGGVDLIAVTLDAPDDWNDHIAMYEYGFSHYHIAKVSSER
VVDKISDPFYRGRLQAVRDLRYPVTDKEESGLRVKVYLLKPRKGWEKYPERAPTEVGKAV
LYLHQKAVDSVPLLYEPGKEGSGRGFLWQAFRFLGVRSDG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccagcgcaagcgccggagcggatcgttcagggctgtctccccttgcaacggcat
tttttcatcatatttgtcccatcgacgcatacacttgtacaaaacgcggctttggggttc
agcctgtttccgccgcgacgtttcttcggctgcggcccgttcagcctaatcggaaaggag
gaacaggcgattcctccccgctccttaaaggagggggatcctcgccgatatgagatgaat
aagcagaagcggctcattgcgctcattcttgcactcgctgcggggattatggcatttgtt
ccagagcggatgcgcgctatggatggggtgagcgcaaaaagcgcgattttgatagagcag
cattccgggcgggttttgtttgccaaggatgcctataccaaacggcgcatcgccagcatt
acgaaaattatgaccgccattttggcgattgaatcggggaagatggacgacacggtgacg
gtcagcgcccgcgctgtccggaccgaagggtcgtcaatttacttgcgccaaggggagaaa
atcaaactgcgcgatttggtatatgggctgatgcttcgttccggcaacgacgcggcggtg
gccatcgctgaacatgtcggcggcagcgtcgaaggatttgtttttttaatgaaccaaaaa
gcggctgaaatcgggatgcgtgataccgagtttgccaatccgcacgggttggatgacgcg
gaaaaccactactcaaccgcgtacgatatggcgctgctcatgcaatatgcgatgaaaaac
aaagagtttcggcgcatctcggggacgaaggtgtaccgcgcccccgctccgcccggcgaa
gacggcgcgcgtgtgtggcgaaataaaaacaagttgttgacaagtctttacgaatattgc
accggcggcaaaaccggctatacgaaacgggcccatcgcacgctcgtgacgacggcgtcc
aaaggcggcgtcgatttgatcgccgtgacgttggatgcaccggacgattggaatgaccat
atcgctatgtacgaatatggattttctcattatcacatcgccaaagtgagcagcgagcgg
gtggtcgacaaaatttctgatccgttttaccgcgggcggctgcaggcggtccgcgatttg
cgatatccggtgaccgataaagaggagagcgggctgcgggtgaaagtgtatttgctgaag
ccgcgcaaggggtgggaaaaatacccagaacgggcgccgacagaggtcggaaaggcggtg
ctttatttgcatcaaaaggcggttgattcggtgccgctgctgtatgaaccgggaaaggaa
ggaagcggccgagggtttttatggcaagcatttcgctttttaggtgtgagaagcgatggt
taa
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