Geobacillus sp. GHH01: GHH_c25500
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Entry
GHH_c25500 CDS
T02455
Symbol
cshB
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ggh03019
]
GHH_c25500 (cshB)
03009 Ribosome biogenesis [BR:
ggh03009
]
GHH_c25500 (cshB)
Enzymes [BR:
ggh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GHH_c25500 (cshB)
Messenger RNA biogenesis [BR:
ggh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GHH_c25500 (cshB)
Ribosome biogenesis [BR:
ggh03009
]
Prokaryotic type
rRNA helicases
GHH_c25500 (cshB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
AAA_19
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGE23061
UniProt:
L8A1Z8
LinkDB
All DBs
Position
complement(2543450..2544760)
Genome browser
AA seq
436 aa
AA seq
DB search
MTETQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLL
PIIEKIKPERAEVQAVITAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKAL
EKLNVQPHIVIGTPGRINDFIREQALDVHTAHILVVDEADLMLDMGFITDVDQIAARMPK
DLQMLVFSATIPEKLKPFLKKYMENPTFVHVDPKQTANENIEHVLIPLRGREKTKLLRDV
LLSYNPYLAIVFVNTRKMADEVADRLAEQGLKVGVLHGDLTPRERRKMMNLIRDLEFQYV
VATDLAARGIDIEGVSHVINYELPDDLQFYIHRAGRTARAGYSGIAATIYEPSDQDAIAR
LEKMGISFVHRDLVRGEWKELPPWNRRSKRAGEKDDELALLFAKLKKTKQVKPGYKKKLR
AELEKKKKRLGRFKKS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacgcagtttactcgttttccgtttcaaccgtttatcatcgaagcgatcaag
acgcttcgtttttataaaccgacggaaattcaagagcgcatcattccgggggcgctgcgc
ggcgaaagcatggtcggccaatcgcaaaccggaacgggaaaaacacatgcgtacttattg
ccgatcattgaaaaaatcaagccggaacgcgccgaagtgcaagccgtcatcacggcgccg
acgcgcgaattagcgacgcaaatttaccacgaaacgctgaaaatcacgaagttttgcccg
aaagatcggatgatcgtcgcccgttgtttgatcggcgggacggataagcaaaaagcgctc
gaaaagctcaacgtgcagccgcatattgtcatcggcacgccggggcgcatcaacgatttc
atccgcgagcaggcgcttgatgtgcatacggcccacatccttgtcgtcgatgaagccgac
ttgatgctcgatatgggctttatcacggatgtcgaccaaatcgccgcccggatgccgaaa
gacttgcaaatgctcgtcttttcagcgacgattccggaaaagctgaagccgtttttgaaa
aaatatatggaaaacccgacctttgtccacgtcgacccgaagcagacggcgaacgaaaac
atcgaacatgtgctcatcccgctgcgcggacgcgagaaaacaaaacttctccgtgatgtg
ctcctcagctacaacccgtatttggccatcgtatttgtcaacacaaggaaaatggctgac
gaggtcgccgaccgtctcgctgagcaagggttgaaagtcggcgtgctgcacggcgatttg
acgccgcgcgagcggagaaagatgatgaatctcatccgcgatttggagtttcaatatgtc
gtcgcgaccgatttggcggcgcgcggcatcgatattgaaggcgtcagtcatgtcatcaac
tacgagttgcctgatgatctgcagttttatattcaccgcgccggacggacggcgcgcgct
ggctatagcggcattgcggcgacgatttacgagccgtctgaccaagatgcgattgcccgg
ttggaaaaaatgggaatttcgtttgtccaccgtgatctcgtgcgcggcgaatggaaggag
ctgccgccgtggaaccggcggagcaagcgggcgggcgaaaaggatgacgaactggcgctg
cttttcgccaaactgaaaaaaacgaagcaggtgaagccgggctacaaaaaaaagctgcgc
gcggagctggagaagaagaaaaagcggcttggccgcttcaaaaaatcataa
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