Geobacillus sp. GHH01: GHH_c25880
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Entry
GHH_c25880 CDS
T02455
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03030
DNA replication
ggh03430
Mismatch repair
ggh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GHH_c25880 (holA)
03430 Mismatch repair
GHH_c25880 (holA)
03440 Homologous recombination
GHH_c25880 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ggh03032
]
GHH_c25880 (holA)
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c25880 (holA)
Enzymes [BR:
ggh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GHH_c25880 (holA)
DNA replication proteins [BR:
ggh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GHH_c25880 (holA)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GHH_c25880 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
FMN_red
Motif
Other DBs
NCBI-ProteinID:
AGE23099
UniProt:
L8A0Q8
LinkDB
All DBs
Position
complement(2580178..2581224)
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AA seq
348 aa
AA seq
DB search
MLERVWGNIEKRRFSLLYLLYGNEPFLLTETYERLVNAALGPEEREWNLAVYDCEETPVE
AALEEAETVPFFGERRVILIKHPYFFTSEKEKEIEHDLAKLEAYLKAPSPFSIVVFFAPY
EKLDERKKITKLAKEQSEVVIAAPLAEAELRAWVRRRIESQGAQASDEAIDVLLRRAGTQ
LSALANEIDKLALFAGSGGTIEAAAVERLVARTPEENVFVLVEQVAKRDIPAALQTFYDL
LENNEEPIKILALLAAHFRLLSQVKWLASLGYGQAQIAAALKVHPFRVKLALAQAARFAD
GELAEAINELADADYEVKSGAVDRRLAVELLLMRWGTRPAQAGRHGRR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgctggaacgcgtatggggaaacattgaaaaacggcgtttttctcttctttatttatta
tacggcaatgagccgtttttattaacggaaacgtatgagcgattggtgaacgcagcgctt
ggccccgaggagcgcgagtggaacttggctgtgtacgactgcgaggaaacgccggtcgag
gcggcgcttgaggaggccgagacggtgccgtttttcggcgagcggcgtgtcatcctcatc
aagcatccatatttttttacgtctgaaaaagagaaggagatcgaacatgatttggcgaag
ctggaggcgtacttgaaggcgccgtcgccgttttcgatcgtcgtctttttcgcgccgtac
gagaagcttgatgagcgaaaaaaaattacgaagctcgccaaagagcaaagcgaagtcgtc
atcgccgccccgctcgccgaagcggagctgcgcgcctgggtgcggcgccgcatcgagagc
caaggggcgcaagcaagcgacgaggcgattgatgtcctgttgcggcgggccgggacgcag
ctttccgccttggcgaatgaaatcgataaattggccctgtttgccggatcgggcggaacc
atcgaggcggcggcggttgaacggcttgtcgcccgcacgccggaagaaaacgtatttgtg
cttgtcgagcaagtggcgaagcgcgacattccagcggcgttgcagacgttttatgatctg
cttgaaaacaatgaagagccgatcaaaattttggcgctgctcgccgcccatttccgcttg
ctttcgcaagtgaaatggcttgcctccttaggctacgggcaggcgcaaattgctgcggcg
ctcaaggtgcacccgttccgcgtcaagctcgctcttgctcaagcggcccgcttcgctgac
ggagagcttgctgaggcgatcaacgagctcgctgacgccgattacgaggtgaaaagcgga
gcggtcgatcgccggttggccgttgagctgcttctgatgcggtggggcacccgcccggcg
caagcggggcgtcacggccggcggtga
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