Geobacillus sp. GHH01: GHH_c26420
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Entry
GHH_c26420 CDS
T02455
Symbol
yrvN
Name
(GenBank) holiday junction DNA helicase
KO
K07478
putative ATPase
Organism
ggh
Geobacillus sp. GHH01
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
GHH_c26420 (yrvN)
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Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
AAA_16
AAA_5
Sigma54_activat
Sigma54_activ_2
TIP49
AAA_22
AAA_14
Cdc6_lid
Mg_chelatase
AAA_28
nSTAND3
TniB
DUF5906
DNAX_ATPase_lid
AAA_25
AAA_3
IstB_IS21
RCF1-5-like_lid
AAA_24
AAA_2
Viral_helicase1
AAA_19
RNA_helicase
Parvo_NS1
AAA_18
TsaE
NPHP3_N
NACHT
DUF815
DAP3
Motif
Other DBs
NCBI-ProteinID:
AGE23153
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Position
complement(2626249..2627544)
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AA seq
431 aa
AA seq
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MPKTTEPLAWRMRPRTIDEIVGQQHIIGPSTPLYKMVKKGHVPSLLLYGEPGTGKTSLAY
AIARTAGREWVAINATTAGKKEIEEAVEAARWSGNVLLFIDEIHRLNKAQQDVLLPHLES
GLVTLIGATTENPFHEVNPAIRSRCGQIQQLKPLTPDDLLIILKRALADPERGVGEPPVV
IDESLLWRIAEAAGGDARVALSLLEAAVAAADERHGRLYIDEDIVASCTANRGFTHDKYG
DHYYSLLSAFQKSVRGSDADAALHYLARLLEGGDLAAVCRRLLVMAYEDIGLANPMMGVK
VQAAVEAAERLGLPEARIPLAVVTIELCLSPKSNSAYKALDAAIADVRSGKLGDIPDHLK
DAHYKGAAALGRGQGYLYPHDYPNSWVAQTYLPSALEGVRYYEPKEHGEEKHYAKVYRRL
EQLKQEVKVQP
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaacgacggagccgcttgcttggcggatgcggccgcggacgatcgatgagatc
gttgggcaacagcacatcattggccctagtacgccgctttataaaatggtcaaaaaaggt
catgttccctcgcttttgctttacggagagccggggacagggaagacgtcactcgcttac
gccattgcccgcaccgccgggcgcgaatgggtcgccatcaatgcgacgaccgccggcaaa
aaggaaatcgaagaggcagtcgaagcggcgcgttggtcgggcaatgtcctcttatttatc
gacgaaatccatcggctgaataaagcgcagcaagacgttttgttgccgcatctcgaatcc
gggctcgtgaccttgattggcgccacaacggaaaacccgtttcacgaggtcaatcccgcc
attcgcagccgctgcgggcaaatccaacaactgaaaccgctcacgccggatgacctcttg
atcattctgaaacgggcgctcgctgatccggaacgaggggtcggcgagccgccggttgtc
attgacgagtcgttgttatggcgcatcgccgaggcagccggtggggatgcgcgcgtcgcg
ctttcgcttctggaggcggcggttgcggctgccgatgagcgccacggccgcttgtatatt
gatgaggatatcgtggcttcatgcaccgcaaaccgcggttttacccatgacaaatatggc
gatcattattattcgttgttgtccgcgtttcaaaaaagcgtgcgcggcagcgatgccgat
gccgcgcttcattatttggcccgtctgcttgaaggcggagacttggcggccgtttgccgg
agattgcttgtgatggcttatgaggacatcggacttgccaatccgatgatgggagtgaaa
gtacaggcagcggtcgaagcggcggaacgcctcgggctgccggaagcgcgcattccgctc
gcggttgtgacgattgaactctgtttaagcccgaaatccaacagtgcttacaaggcgctg
gacgctgccattgccgatgtccgttccggcaagcttggcgatattccggatcatttaaaa
gacgctcattacaaaggggcggctgcactcgggcgtggacaaggctacttgtatccgcac
gattatccgaacagctgggtggcgcaaacgtatttgccctccgctctggaaggcgtccgc
tattatgaaccgaaagagcatggcgaggaaaaacattacgccaaagtgtaccggcggctt
gagcagttgaaacaagaggtcaaggttcagccgtga
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