Geobacillus sp. GHH01: GHH_c26650
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Entry
GHH_c26650 CDS
T02455
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GHH_c26650 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ggh03400
]
GHH_c26650 (ruvB)
Enzymes [BR:
ggh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GHH_c26650 (ruvB)
DNA repair and recombination proteins [BR:
ggh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GHH_c26650 (ruvB)
RecFOR pathway proteins
GHH_c26650 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
Rad17
nSTAND3
AAA_14
AAA_22
DUF815
NB-ARC
AAA_3
TsaE
IstB_IS21
AAA_18
AAA_25
AAA_24
Resolvase
bpMoxR
RNA_helicase
AAA_17
NTPase_1
Sigma54_activ_2
AAA_28
NACHT
Bac_DnaA
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AGE23176
UniProt:
L8A298
LinkDB
All DBs
Position
complement(2654553..2655554)
Genome browser
AA seq
333 aa
AA seq
DB search
MKERLVSGEVLGEETALEPSLRPQYLHEYIGQDKIKENLKVFIEAAKLREETLDHVLLYG
PPGLGKTTLAVIIANEMGVKLRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRAV
EEVLYPAMEDYCLDIAIGKGPDARTLRLDLPPFTLVGATTRAGALSAPLRDRFGVISRLE
YYHVDQLAQIIERAAAILQIGIEREAALELARRARGTPRIANRLLRRVRDFAQVRGEGGI
TLPLAVEALERLQVDRLGLDQIDHKLLSAMIEKFAGGPVGLETLAAVIGEEAQTIEEVYE
PYLMQIGLLQRTPRGRVVTPAAYTHLGMEVPKR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaacggcttgtatccggggaggtcttaggggaagagactgcgcttgaaccgagt
ttgcgcccgcaatatttgcatgaatatatcgggcaagataagatcaaagaaaacttaaaa
gtgttcattgaagcggccaagctccgcgaagagacgctcgaccatgtgctgctttatgga
ccgccgggacttgggaaaacgacgctcgccgtgatcatcgccaatgaaatgggcgtcaag
ctgcgagcgacatctggaccggcgctcgagcggccgggagatttggcggcgcttctcact
tcgcttgagccgggggatgtgctctttattgatgagatccaccggctgccgcgggcggtg
gaagaggtgctctatccggcgatggaagattattgcttagatatcgcgatcggcaaaggg
ccggatgcgcgcacgcttcgcctcgacttgccgccatttacgctcgttggggcgacgacg
agagccggggcgctgtcggcgccgctgcgcgaccggtttggtgtcatcagccggctcgaa
tactatcacgtcgaccaactcgcccaaatcattgagcgggcggcggccatcttgcaaatc
ggcatcgagcgcgaagcggcgcttgagcttgcccgtcgggcgcgcggcacgccgcgcatc
gccaaccgtttgctgcggcgcgtccgcgattttgcgcaagtgcgcggagaggggggaatt
acgctgccgcttgctgtcgaggcgctcgagcggctgcaagtcgaccggctcgggctcgac
caaatcgaccataagctgctttcagcgatgattgaaaaattcgccggcggcccggtcggg
ctcgaaacgctggcggccgtcatcggcgaagaagcacaaacgattgaagaagtgtatgag
ccgtacttgatgcagatcggtctcttgcagcgtacgccgcgcgggcgcgtcgtcacgccg
gctgcgtacacccatttaggaatggaggttccgaagcggtga
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