Geobacillus sp. GHH01: GHH_c28590
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Entry
GHH_c28590 CDS
T02455
Symbol
lcfA5
Name
(GenBank) long chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh00061
Fatty acid biosynthesis
ggh00071
Fatty acid degradation
ggh01100
Metabolic pathways
ggh01212
Fatty acid metabolism
ggh02024
Quorum sensing
ggh04146
Peroxisome
Module
ggh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GHH_c28590 (lcfA5)
00071 Fatty acid degradation
GHH_c28590 (lcfA5)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GHH_c28590 (lcfA5)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GHH_c28590 (lcfA5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ggh01004
]
GHH_c28590 (lcfA5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ggh04147
]
GHH_c28590 (lcfA5)
Enzymes [BR:
ggh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GHH_c28590 (lcfA5)
Lipid biosynthesis proteins [BR:
ggh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GHH_c28590 (lcfA5)
Exosome [BR:
ggh04147
]
Exosomal proteins
Exosomal proteins of breast milk
GHH_c28590 (lcfA5)
Exosomal proteins of breast cancer cells
GHH_c28590 (lcfA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AGE23370
UniProt:
L8A083
LinkDB
All DBs
Position
complement(2856627..2858162)
Genome browser
AA seq
511 aa
AA seq
DB search
MRLTDIWKRNIEEYGPYPLLVFEGKEYTNIECDTRSSQLAHALIELGVKPGDRVVVTMPN
SPEVIIAFSGVLKAGAVVVPVLPLLQTQELHYIFKDCQPKVVLTAEMLWAKAKEAANGLP
APPMIVTLDAPDSPHSLRTRMEQAPASLTTSEVNENDPAALLYTSGTTGQPKGVVLTHRN
LSTNAEAAAEMAKRLPTEFARVGLGVLPISHAFGFTMMNVALLLGDQVVLLPYFEPKKAL
EAIERHRVTHTAMVPAMFHALCHYAEADRYDTSSLVACISGSAALPPELAEQFQRKFNCL
ILEGYGLSEAAPIVTATDPTKPIKLGSVGLPLPGVRVAVVDEYGNPLPPNEVGELIVSGP
NVFQGYYGKDEETRQALRDGWLYTGDMARIDEDGYVFIVDRKKDVIIRGGFNIYPRDIEE
LLMSHPDVLEAGVVGVPSPKMGEEVAAYVVVRRGAQVTEAELIEFCQKRLAKYKTPRFLK
KVGYLPKTMIGKIDKKKLREWASEFIPAVQS
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgacggatatttggaaacgaaacatagaggaatatggaccgtatccgttgctg
gtattcgaaggaaaagaatatacgaacattgaatgcgatacccgttcgtctcagctggct
catgcattgattgaacttggggtcaagccgggcgaccgcgttgttgtaacgatgccgaac
agcccggaagtcatcatcgcctttagcggcgtcttgaaagcaggagcggttgtcgtgccg
gtgttgccgctgttgcagacgcaggagctccattacatttttaaagactgccaaccgaaa
gtggtgctgacggcggaaatgctgtgggcgaaagcgaaagaggccgccaatggcttgccg
gcgcctccgatgatcgtcacgctggacgctccggattctcctcactctttgcgaacgaga
atggaacaagctcctgccagcctgacgacgtcggaagtcaatgaaaacgatcctgcggct
ttgctttacacgtcgggaacgaccggccagccgaaaggggttgtgttgacgcaccgcaat
ttgtccacgaatgcggaagcggccgctgagatggcgaagcggctgccgaccgaatttgca
cgcgtcggccttggggtattgcccatctcccatgcgttcggatttacgatgatgaacgtc
gcgctccttttgggggatcaagtcgtccttctgccgtattttgagccgaaaaaagcgctc
gaagcgatcgagcggcatcgggtgacgcatacggcgatggtgccggcgatgtttcatgct
ttatgccattatgccgaggccgaccggtacgacacttccagcttggtggcttgcatatcc
ggttctgcggcgctgccgcccgaacttgctgagcagtttcagcgcaagttcaactgtctt
attttggagggatacggtctgtccgaggcggcgccgattgtgacggcgacggatccgacg
aaaccgatcaagcttggatcagtcggcttgccgcttcccggggttcgggtggcggtcgtc
gatgaatacggaaatcccctgccgccaaacgaagtcggagaactgattgtgtcgggtcca
aacgtttttcaaggctactatggaaaagacgaggagacccgccaggcgctgcgcgacggc
tggttgtataccggcgatatggcgcgcatcgatgaggacgggtatgtgtttatcgtcgat
cggaaaaaagatgtcatcattcgcggtggattcaatatttacccgcgcgatatcgaggag
ctgctgatgtcccatccggacgtgctggaagccggcgtcgtcggcgtcccttcaccgaaa
atgggcgaagaagtcgccgcgtatgtcgtcgttcggcgcggggcccaagtgacggaagcg
gagctgatcgagttttgccaaaagcggttggcgaaatacaaaaccccgcgctttttgaaa
aaggtcggctatttgccgaaaacgatgatcggcaaaatcgacaaaaagaagctgcgcgaa
tgggcgagcgagttcattcccgctgttcaatcgtaa
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