Geobacillus sp. GHH01: GHH_c31320
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Entry
GHH_c31320 CDS
T02455
Symbol
sigL
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh02020
Two-component system
ggh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GHH_c31320 (sigL)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GHH_c31320 (sigL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggh03021
]
GHH_c31320 (sigL)
Transcription machinery [BR:
ggh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GHH_c31320 (sigL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_23
HTH_Tnp_ISL3
Sigma70_r4
HTH_3
HTH_12
HTH_Crp_2
Sigma70_r4_2
HTH_17
HTH_IclR
HTH_AraC
HTH_11
HTH_10
LacI
HTH_32
HTH_38
HTH_AsnC-type
HTH_24
MarR_2
TrmB
Fe_dep_repress
HTH_28
HTH_21
MarR
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AGE23624
LinkDB
All DBs
Position
complement(3117492..3118799)
Genome browser
AA seq
435 aa
AA seq
DB search
MRAELWQEQRLQLSLTKELVQAIELLQYSAVDLEAFLYEQSLENPFLEIRRTRVRQRPSR
TERDQKQWLENIGARAETLVGHLLSQLPALKLADREERIVRYLIASLDEDGYLRVPLAEL
AARFSASEQEMERGLRLVQSLDPPGVGARDLAECLLLQLERLPERDELAETIVRYHFVPF
AEKSWKTLAKQLGVSLGELQRVFELIRTLEPRPGIHYSSETPPLVVPDVIVTRGADGDWM
AAYNDDIHPELGWNRDYERRIAASGDRHAEQFIKEKYRQFTWLAKSLEQRKQTLLHLTAV
IIDRQRPCLELGLSALKPMTMREVAEELGVHESTVSRAVRHKYVQTPFGTVELRRFFSNA
ATAAGDEAASSARVKAIIEALISEEDRRAPLSDQQLADLLRDRHGIAISRRTVAKYREQL
RIPSSAKRRQYIGLP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgagggcggagttatggcaagagcagcggctgcagttgtcgctgacaaaggaactggtg
caggcgattgaactgttgcaatattccgcagtggatttggaagcgtttttatatgaacag
tcgctggaaaacccgtttttggaaattcgccgcacccgggtgcggcaacggccaagccgg
acagaaagagaccaaaagcaatggctcgagaacattggcgcccgcgcagagacacttgtt
ggccatttgctttctcagctgcctgcgttgaagctggccgatcgggaagagcgcatcgtc
cgttatctcattgcctcgctcgatgaggatggctatttgcgcgtgccgcttgccgagctg
gcggcgcggttttccgcatcggaacaagagatggaacgggggctgcgccttgtgcagtcg
ctcgacccgccgggagtcggcgcccgcgatttggcggaatgcctcttgctgcagcttgaa
cgtcttcctgagcgcgacgagctggcggaaacgatcgtccgttatcattttgttcctttt
gcggaaaagtcgtggaaaacgctggccaagcagcttggcgtcagccttggcgaactgcag
cgcgtcttcgagctcattcgcacactcgagccgcggccgggcattcactattcgagcgaa
acgccgcctttggtcgtgccggatgtcatcgtcacccgcggggcggatggagactggatg
gccgcctataatgatgacatccatccggagctcggatggaatcgggattacgagcggcgc
atcgccgcatccggcgaccggcatgccgaacagtttatcaaagaaaaatatcggcagttt
acatggctcgcgaaaagtttggagcaacggaaacagacgcttctccatttgacggccgtc
atcatcgaccgccagcgcccgtgtttggagttggggctttcggcgctcaagccgatgacg
atgcgcgaggtggccgaggagctcggcgttcatgaatcgacggtgagccgcgcggtccgg
cataaatatgtgcaaacgccgtttggcaccgtggagctgcgccgtttcttttcgaatgcc
gcgacggccgcaggggatgaagcggcatcgtccgcccgcgtgaaagcgatcattgaggcc
cttatttccgaggaagatcggcgggcgccgctgtctgaccaacagcttgctgatttgctt
cgcgatcggcacggcatcgccatttcgcgccgcacggtcgccaaataccgcgagcagctg
cgcatcccgtcttcggcaaagcggaggcaatatatcggcctgccgtaa
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