Geobacillus sp. GHH01: GHH_c34300
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Entry
GHH_c34300 CDS
T02455
Symbol
appF
Name
(GenBank) oligopeptide ABC transporter
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
ggh
Geobacillus sp. GHH01
Pathway
ggh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ggh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GHH_c34300 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggh02000
]
GHH_c34300 (appF)
Transporters [BR:
ggh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GHH_c34300 (appF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_22
AAA_16
AAA_33
DUF87
MMR_HSR1
RsgA_GTPase
NNH5
AAA_29
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AGE23920
UniProt:
L8A1X9
LinkDB
All DBs
Position
complement(3425402..3426379)
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AA seq
325 aa
AA seq
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MSQSKQPLLKLENVKKYYPIRGGLLRRIQGYVKAVENVSLDVFAGESVGIVGESGCGKST
LGRTILGLEEATGGAIFFRGEEISRLPERQRKKWKKEMQMVFQDPYASLNPRQRIGHALE
EAFIIHTNMTKAEREERVLHLLQEVGLRPEHYDRYPHEFSGGQRQRIGIARAIALNPSLV
ICDEAVSALDVSVQAQIIKLLKDIQEKHELTYLFISHDLGVVRHFCNRVLVMYLGHAVEL
APSRELYANPLHPYTKALLSAIPRPKPGARRERIRLEGDLPNPANPPKGCPFHTRCPVAT
ERCKQERPEWKEAAPGHFVACHEVK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtccaagcagccacttcttaaactggaaaacgtcaaaaaatattacccaatc
agagggggactgctgcggcgtatccaaggctatgtcaaagcggtcgaaaacgtctctctc
gatgtgtttgctggggaaagcgtcggcatcgtcggtgaatcgggatgcggaaaatcgacg
ctcggtcggacgattctcggccttgaagaggcgacgggtggcgccatcttctttcggggt
gaggagatcagccgcttgccggaacggcaacgcaaaaaatggaaaaaagagatgcagatg
gtgtttcaagatccgtacgcgtcgctcaaccctcgccaacgcatcggacatgccttggag
gaagcgtttatcatccatacgaacatgacaaaggccgaacgcgaagagcgggtattgcat
ttgcttcaagaagtcgggcttcgcccagaacattacgaccgatacccgcatgaattcagc
ggcgggcaacgacagcggatcggcatcgcccgagcgatcgccttaaacccgtcgctcgtt
atttgcgatgaggcggtctctgcgttggacgtatcggttcaagcgcaaatcattaaactg
ttaaaagacatccaagaaaaacatgaactgacgtatttgttcatctcccacgatttaggg
gtcgttcgtcatttttgcaaccgggtgcttgtcatgtatttaggccatgcagtggagctg
gctccgtcgcgggagctgtacgccaatccgctgcacccatatacgaaagcgttattgtct
gccattccgcggccgaagccgggcgctaggcgggagcgcattcgtcttgaaggggatttg
ccgaacccggccaacccgccaaaaggatgcccgttccatacgcgctgcccggtggcgacc
gaacgatgcaaacaagagcggccggagtggaaagaagcggctccaggtcattttgtcgct
tgccatgaagtgaagtaa
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integrated database retrieval system
