Gavialis gangeticus (Gharial): 109286827
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Entry
109286827 CDS
T07453
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ggn
Gavialis gangeticus (Gharial)
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ggn03036
]
109286827 (HFM1)
Enzymes [BR:
ggn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109286827 (HFM1)
Chromosome and associated proteins [BR:
ggn03036
]
Eukaryotic type
Meiosis-specific proteins
Others
109286827 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_C
ResIII
DEXQc_Suv3
AAA_22
Motif
Other DBs
NCBI-GeneID:
109286827
NCBI-ProteinID:
XP_019357135
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MEVLRAVTEIPSPFRNIFKDFPYFNYIQSKALDDLLYTDRNFVICAPTGSGKTVMFELAI
TRLLMEVPMPWLNIKIVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIQ
HAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHVVKDESRGATLEVVVSRMKTVQS
SVSRNSENPNTFPSMRFVAVSATIPNAEDIAEWLTDSKKPAVCLKIDENHRPVKLCKVVL
GFPCSGNQTEFKFDLTLNYKIASVIQTYSEQKPALVFCATRKGVQQAASVFAKDAKFIMT
TEQRQRLQRSANSIKDSKLRDLLIYGVAYHHAGMELSDRKIIEGAFTVGDLPVLFTTSTL
AMGVNLPAHLVVIKSTMHYVGGMFQEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRE
KYVQMLNGADTIESSLHKHLVEHLNAEIVLHTITNVNIALEWIRSTFLYIRALKNAVHYG
FSPGLDRVGIEAKLQELSLKNVNDLASHDLIKMDEKLNFRPTENGKLMAWYYIAFDTVKQ
FSTIKGTETLSELVTKISSCTEFSDIKLRTSEKKILNALNKDKNRITIRFPMEGKIKTTE
MKVNCLIQAQLGCIPIQDFTLTQDIGRIFRTGIRVTKWLSDFLASQRNSFSALLNSLILA
KCFRCKLWENSLHVSKQLEKIGVMLSNAMVNSGLTSFKKIEDTNARELELILNRHPPFGN
QIKESVIHLPKYALDIEQVSKYSDTVAEILVTVILTNFKQLQTRRTAPDFHYVTLIIGSA
DNEVIFKQKIMDLALLKTGNWTKKIEVKRALKSEELSINVISSDYVGLDIQQNYTAFYLG
AKRFGNQVVVHRKSDAESSLDVYHTSSIKASSVRIDTGSTCNQEVSYTRSGNRECNHHCK
NKDTCGHDCCKIGVSQKSELKRDSKFSSYLSDLRNRSSISSVPPVKRLKMQLLNQTQNVD
LKQFVYTPKSLLPALPRSEYAESPASSVDQCENVDNLGRFEKQLPQESYEKINLSWKHSS
NVGEKTHQAMMSNKNLESSMPNLTDADKSSSWFSKALNVNFELGDEVWDDFDDEKLIYAC
SFSSDLANKDLGSGSSCLQNTIQHKPLFQNTQYEVISDTSGNVDKLQDKMGVHPQNSLSP
TLNAPSKMKLPTQNGNTNNFSFQAKKHPNPSEVKKTFCSSNSGTVSESSKSSEKGDFFIC
NKERKSEIDLRYLPDDEANDVKPFLGIFDGIF
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctgagagctgttacagaaatcccttctccatttagaaatattttcaaggat
tttccatattttaactacatacaatccaaggctttggatgatcttctttacacagatagg
aattttgtgatttgtgctccaactggctctggaaaaactgtaatgtttgaactagctatt
accaggctactaatggaagtgccaatgccttggttaaatattaaaattgtatatatggca
cccataaaagctctgtgtagtcaacgatttgatgattggaaagaaaaatttggacctatt
gggcttagctgtaaggaactgacaggagatacagtggtggatgatttatttgaaatacaa
catgctcatattattatgaccacaccagaaaaatgggatagtatgactagaaaatggaga
gacaactctttagtccagctggtacgattgttcctcatcgatgaggtacatgttgtgaaa
gatgaaagccggggtgcaacactcgaggtggtagtcagtcggatgaaaactgtacaatct
tctgtttcacgtaactcagagaatcccaacacatttccttccatgagatttgtggctgtt
tctgcaacaatcccgaatgctgaagatattgcagaatggctgacagatagtaagaagcct
gctgtatgtttgaaaatagatgagaatcaccgaccagtgaagctttgcaaagttgttctt
ggatttccctgcagtggcaaccaaacagaatttaaatttgacttaactcttaactacaaa
atagcaagcgttatacaaacatactctgaacaaaaaccagcacttgtgttttgtgccaca
aggaaaggagtacagcaagctgcttctgtttttgcaaaagatgctaaattcataatgact
acagaacagagacaaagattacagaggtctgcaaattcaataaaagattccaaactaaga
gatctcctaatatatggtgtggcttatcatcatgctggtatggagctatctgatagaaaa
ataattgaaggagcatttactgtgggagacttgcctgtactttttactactagtacctta
gctatgggagtaaatttacctgcacatctggttgttataaagtccacaatgcattatgtt
ggaggaatgtttcaagaatatagtgaaactgatattctgcaaatgattgggagagcagga
agaccacaatttgacacaaccgctacagctgttattatgactcgcttaagtacaagagag
aagtatgtacagatgttaaatggtgcagatacaatagagagcagtttacataaacatctt
gttgagcatttaaatgcggaaatagtgctacataccataacaaatgtgaatatagctttg
gaatggataagatcaactttcctatacatcagagctttgaaaaatgcagttcattacggt
ttttcacctggattagacagagttggaattgaagcaaagttacaagaattgagtttgaaa
aatgtgaatgatctagcttctcatgacttgatcaagatggatgaaaaactgaatttcaga
ccaacagaaaatggaaaactaatggcttggtactatattgcatttgatacagtgaaacag
ttttctacaattaaaggaacagagactttatccgaactggtcacaaagatatcaagctgc
actgaattttcagatatcaagttaagaacaagtgaaaagaaaatactgaatgctttgaat
aaggacaagaacaggataactatcaggtttccaatggaagggaagataaaaacaacagaa
atgaaagtaaactgtcttattcaggctcagctaggatgcattcctattcaagactttact
ttgacgcaagatataggcagaattttcagaactggcataagagttactaaatggttgtct
gactttctggcatcacagagaaacagcttttctgcactattaaactccttaattttagct
aagtgtttcagatgcaaactatgggaaaactcactgcatgtttccaaacagctggaaaaa
attggtgtgatgctgtcaaatgcgatggtaaattcaggtctgacatcatttaaaaaaatt
gaagatacaaatgcaagagaacttgaattgatcttaaacagacaccctccttttggaaac
caaataaaagagtctgtgatacaccttccaaaatatgcacttgatattgagcaggtttca
aaatacagtgatacagtggctgaaatcttagtgactgtcatattaacaaacttcaaacaa
ctgcagacaaggagaacagcaccagatttccattatgtaaccttgataataggaagtgct
gataatgaagtcatttttaaacaaaaaattatggatttggctttgctgaaaactggaaat
tggactaaaaaaattgaagtgaaaagagctctcaaatcagaggaacttagcataaatgta
atcagttctgactatgttgggcttgatattcagcaaaactatacagccttttacttagga
gcaaaaaggtttggaaatcaagtagttgtacacagaaaatcagatgctgagtcttcactt
gatgtatatcacacatcttcaataaaagcatcttcagtgagaatagatacaggaagcacc
tgtaaccaagaggtctcctacacaagatctggaaacagagaatgcaaccatcactgtaag
aataaagatacctgtggacatgactgttgtaaaatcggagtttctcagaagtctgagttg
aagagagattcaaaattttcttcatacctatctgacttaaggaacagaagctcaatttca
tctgtacccccagtgaaacgattaaagatgcagctactgaatcaaactcagaatgtggat
cttaaacaatttgtttatacacccaaatctttgctgccagcattgccaagatctgaatat
gcagagtctcctgcatcgtcagtagatcagtgtgaaaatgttgataaccttggaagattt
gagaaacaactaccacaggagagctatgaaaagattaatttatcttggaaacattcttca
aatgtgggtgagaagacccatcaggcaatgatgtcaaataaaaatcttgaatcttcaatg
cctaacttgactgatgcagataaaagcagctcttggttttcaaaggctctgaatgtgaac
tttgagttgggagatgaggtttgggatgattttgatgatgagaaattaatatatgcttgc
agcttttccagtgatctggcaaataaagatttaggatctggaagctcctgccttcaaaat
acaatacaacataaaccactattccagaacacacaatacgaagtcataagtgacacttca
ggaaatgttgacaaattgcaagataagatgggtgttcatccacagaattctctctctccc
acattaaatgcaccatcaaaaatgaaattgccaacacagaatggaaatacaaataatttc
agctttcaagcaaaaaaacatcccaatccttctgaggtgaaaaaaacattttgttcttca
aactcaggaacagtctcagagtcttctaaaagtagtgaaaaaggggatttttttatctgt
aataaagaaagaaaaagtgaaattgatctcagatatcttccagatgatgaagccaatgat
gttaagccttttcttggaatatttgatggtattttctaa
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integrated database retrieval system
