Gavialis gangeticus (Gharial): 109286853
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Entry
109286853 CDS
T07453
Symbol
ABCA4
Name
(RefSeq) retinal-specific ATP-binding cassette transporter
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109286853 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ggn02000
]
109286853 (ABCA4)
Transporters [BR:
ggn02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
109286853 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_22
SRP54
Pep1_7
Motif
Other DBs
NCBI-GeneID:
109286853
NCBI-ProteinID:
XP_019357182
LinkDB
All DBs
Position
Unknown
AA seq
2330 aa
AA seq
DB search
MSFFRQVRLLLWKNWILRKRQKLRFLVELVWPLSLFLSLVWLRNANPLYRQHECHFPNKA
MPSAGTLPWLHGIFCNMNNPCFQRPSPGESPGVVSNYKNSILARVYQDVQEVLLEAPETR
DLGRMWEQLRTMTQFMETIRTNPERIAGRGLRIRDILKDGETLTPYLLDVVGLSDFVVFQ
LMNSQVRPEQFAYGVPDLALEDIACSRMLLDRFIIFSSRKGLPAVHKAMCALSQGSLQRI
ENVLYANVDFFKLFRLLPTVLDSNSAGVDLQYWGIVLSDVFQALRELARRSSIQDLLEVI
QPFFQDGEPASLGHLMNSLSDLFCGYPEGGGTRVFSFNWYEDNNYKAFLGIESTKKESIH
FYDNTTTPFCNALIQRMESNPLTKIAWSVAKPLLMGKILFAPDSPAVRQILKNANSTFEE
LGRLRLLTKAWEEVGPQLWHFFQNSQQLNMIRDTLKHPTVRDFLNTQLDNEGLTAEYVIN
FLHNGSPESREEGMADFDWRNIFNATDQALRLLHQYLECLTLDKFEGHADETQLTHRALH
LLEENRFWAGVVFPDMHHMTSKVPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVED
LRYIWGGFAYLQDMIEHGIIKTQTNTEVPTGIYLQQMPYPCFVDDVFMITLNRSFPIFMV
LAWIYSVSMIVKSIVLEKETRLKEALKNRGVTNGVIWYTWFLDSFIMMALSTFLLTALIA
HGQVLHYTDPFILFLFLLTFSAATIMQCFLLSTFFSKANLAAACSGVIYFTLYLPHIVCF
SWQDRLTVHLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWDNIKTSPLEGDQYSFDWSI
RMMLFDAFLYGIFAWYLDNVFPGDYGIPQPWYFPLQESYWFGSGFPKAKKTAAGDEKSPE
EDGADKVKEEEKSKIMTQKDIKLEERSGNQGEKDSKDKKCKHKRKKDPDEQEKPKAKAQD
TDITMNPFFEAEPSDLVPGVCIQNLVKIFGNSTKPAVDGITVTFYEGQITAFLGHNGAGK
TTTLSVLTGLFPPTSGTVLVGSEDIQMHMDSIRQKIGMCPQYNILFNHLTVAEHILFYAQ
LKGRSKKEAELELEMMLEEIGLPHKRNEEAQNLSGGLQRKLSVAIAFVGEAKVVVLDEPT
SGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRIAIISQGKLYCSGSPIFLKN
IFGTGFYLTLVRKMKNIRCKEQKDVTHCSCDSHCSCPCSNCASSHKEGAPEQELDGDLNQ
LTTLIHHHIPEAKLIENIGQELIYLLPNKDFKQSSYASLFRELEETLDDLGLSSFGISDT
PLEEVFLKVTAGADPATQNTGNAQENGSAPTRISTEKNEKAEQTPSAVNSTSQTPVGLAE
DDSEGKASYQYKGFQLIHQQIKALLIKRFCHATRSQKDFLAQIVLPSSFVLLALILTLIV
PPFGEYPSLTLHPGIYGHQFVFFSNERPGSEQMVSLTDAFLNKPGFGNRCMKEQPLPNYP
CSNMSTAWNVPTVSSNVTNVFWVRTWSPDNPTPSCKCSTHKKLTMLPECPPGAGGFPPPQ
RVQWSTEILQDLTYRNITDFLVKTYPTLIKGSLKSKYWVNEQRYGGISIGGKLPVLHVTG
VQIADFLRDLGLMLNVKGGHASMAASNEMSDFLKYMETEDNVKVWFNNKGWHAMVIFLNI
ANNGVLRANLQKGQSPEEYGITVINHPLNLTKEQLSEVTVLTTSVDAAVAICVIFAMSFI
PASFVLYLIQERVTKAKHLQFVSGVTAAVYWLTNFFWDIVNYVVSATMVVGIFIGFKKKA
YTSPSNLPVLIALLLLYGWAVIPMMYPAAYLFSVPSTAYVALSCINLFIGINSSAITFVL
ELFENNPSLLKFNNKLKNLLLIFPHFCLGRGLIDLAMNQAVTDVYARFGEERVSNPFQWD
FIGKNLFAMAVEGIVYFALNLFMQHRFFHTRWFYYPVTTPINDEDEDVAEERQRILKGGS
KTDVLTLKELTKLYATGQRPAVDRLCVGIRPGECFGLLGVNGAGKTTTFKMLTGDTDVTT
GDAVVAGNSILTNISDVHQSMGYCPQFDAIDDLLTGREHLRLYACLRGVPGKEIERVAEW
GIQKLGLHMYADQLAGTYSGGNKRKLSTAIALIGCPPLILLDEPTTGMDPQSRRLLWNAI
VSVIKEGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQHLKYKFGDGYIVTLKIKA
PKPGVPPDPTSAEHFIHANFPGSLQKEKHYNMLQYQICSSSLAKIFRLLLANKESLSIEE
YSVSQTTLDQVFVNFAKQQMEDETIPLHPRAAGARREVKVYPDTPAQTSA
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttcagacaggtcagacttctgctatggaagaactggatactcagaaaaagg
caaaagcttcgttttctggtggagctcgtgtggcctctgtcattatttctttcccttgtc
tggctgaggaatgctaacccactctaccgccaacatgaatgtcattttccaaataaggca
atgccatctgcaggaacactgccatggttacatggcatcttctgtaacatgaacaatcct
tgcttccaaagacccagtcctggagagtcccccggcgttgtgtctaactacaaaaattcc
atattagcaagagtgtatcaggatgttcaagaggtcttactggaagctcctgaaacccgt
gacttaggccgcatgtgggagcagctgcgcacgatgacccaatttatggaaaccataagg
accaatcctgaaagaattgcaggaagaggactgcggatccgagacatcttgaaagacggg
gagactctaaccccctacttactggatgttgttggcctctcagactttgtggttttccag
cttatgaattctcaagtgcgccctgaacagtttgcctacggagtccctgacttggctctg
gaggacattgcctgcagcaggatgctacttgaccgcttcattatcttcagcagccgaaaa
ggtctgcctgctgtgcacaaagcaatgtgtgccctctcccagggaagcctccagagaata
gaaaatgtcttgtatgcaaatgttgatttcttcaagcttttccggctgcttcccactgtt
ttagacagtaactcagcaggtgttgacctgcagtactgggggatagtgctgtctgatgtg
tttcaagcactgcgagagctagccaggagatcaagcatacaggaccttctggaggttata
cagccatttttccaagatggagagccagcatccttaggccatctgatgaactccttgtct
gatcttttctgtggctacccagaaggaggtggtaccagagtgttctccttcaactggtat
gaagataataactacaaggcctttcttgggattgaatccaccaagaaggaatccattcat
ttttatgacaacacaaccacacctttttgtaatgcactgatccagcgcatggaatcaaac
cctttgaccaaaatagcctggagtgttgcaaagcccctgctgatgggaaaaatcctcttt
gctcctgattctcctgctgtaaggcaaatactgaaaaatgcaaactccacctttgaggaa
cttgggcgcctcagactgttgaccaaagcctgggaagaagtgggacctcagctgtggcat
ttctttcaaaacagccagcagcttaacatgatccgagacactttgaagcaccccacagtg
agagacttcttgaacacacaactggataatgaaggtttaaccgctgaatatgtgatcaac
tttctccataatggctccccagagagccgagaggaaggcatggcagactttgattggcgg
aatatcttcaatgccacagaccaggccttgcgtttgttgcatcagtatcttgagtgcttg
accctggataaatttgaaggtcatgctgatgaaacccaactgacacatcgtgcccttcac
ctgctggaggaaaacagattctgggctggagttgtctttcccgacatgcatcacatgacc
agcaaggtgccacctcatgtgaaatacaagatccggatggacatagatgcagtggagaaa
acaaataaaatcaaagacaggtactgggatcctggtccaagagctgacccagtggaggat
ttacgttacatctggggaggatttgcatatctgcaagacatgattgaacatgggatcata
aagactcagaccaacactgaagtgccaacaggaatctacctgcagcaaatgccctatccc
tgctttgtagatgatgtctttatgatcaccctgaaccgctccttccccatcttcatggtg
ctggcttggatctattcagtttccatgattgtgaagagcattgttctggagaaagaaacg
agactgaaagaggccttgaagaacaggggagtcactaatggggtgatctggtacacctgg
tttctagacagcttcatcatgatggctctgagtacatttctcttaacggcattaattgcg
catggccaggttcttcattataccgatcccttcatcctttttctgtttctgctgacattc
agtgcagccaccatcatgcagtgtttcttgctcagcaccttcttctccaaagccaatctg
gcagctgcctgcagtggagtcatctacttcaccctctacctgccccacatcgtctgcttc
agctggcaggatcgtttgactgttcatctgaagattctggcaagtttgctttctcaagtg
gcttttgggtttggtacagagtacttatcacgctatgaagagcaaggtcttgggctgcaa
tgggacaacattaaaactagtcctttggaaggagaccagtacagttttgactggtccata
aggatgatgctttttgatgcttttctatatggaatatttgcctggtacctcgataatgtt
tttccaggagactatggaataccccaaccttggtatttccctctgcaggagtcttattgg
tttgggtctggattcccaaaagctaagaaaacagcagctggtgatgagaaaagtccagaa
gaagacggtgcagacaaggtcaaagaagaggaaaagagcaaaatcatgacacagaaagac
atcaagctggaggaaaggagtggcaaccagggggagaaggacagcaaagataaaaaatgt
aaacataaaaggaaaaaagatcctgatgagcaggagaagcctaaagcaaaggcacaggac
acagatataaccatgaaccccttttttgaagctgaaccttcagacctggtcccaggagtg
tgcatacagaacttggtgaagatatttggaaacagcacaaagccagcagtggatggaata
actgttactttttatgagggccagatcacagccttccttggccacaatggagcaggaaag
acaaccaccctgtcagtcctgacaggcttgttcccacccacatctggaactgtcctggtt
ggcagtgaggatatccaaatgcacatggactctattcgacagaaaataggcatgtgccct
cagtacaacattttattcaaccaccttactgtagcagagcacatcttgttttatgcccaa
ctgaaagggagatccaaaaaagaagccgagctggagctggagatgatgctggaagagata
ggtctcccccataaaaggaatgaagaggctcaaaacctgtcaggtggcttgcagagaaag
ctatcagttgccattgccttcgtcggtgaggcaaaggtggttgtcttggatgagcctacc
tctggagttgatccatattccaggaggtctatctgggatcttctactgaagtatcgttca
ggcagaaccattattctctcaacccatcatatggacgaggctgacatccttggagaccgg
attgccatcatatcccaagggaaactgtactgctcaggctctcccatcttcctgaagaac
atctttggaactggcttctatcttaccttggtccgcaagatgaaaaatatccgatgtaaa
gaacaaaaagatgtgacccactgcagctgtgactcccattgttcctgcccctgctccaac
tgtgcatcttcacacaaggagggagctcctgaacaagaactggatggggatctgaatcag
ctaacaaccctaattcatcatcatattcctgaagcaaaattaattgaaaacattggtcag
gaactcatctaccttttgcccaataaagattttaaacaaagctcttatgccagcctcttc
agagaattggaggaaactctggatgacctaggactcagtagttttgggatttcagacaca
ccgcttgaagaggtgtttctgaaggtcactgcaggggctgaccccgcaacacagaacaca
ggaaatgctcaagaaaatggctctgctcccacaagaatctccactgagaaaaatgagaag
gctgaacaaaccccctcagcagtgaacagcacctctcaaactcccgtaggcctggcagaa
gatgacagtgaaggcaaagcctcctatcagtataaaggtttccagcttatccaccagcaa
atcaaggcactgctcatcaaacggttctgccatgctacccggagccaaaaggacttcctt
gctcagattgttctcccttctagttttgtgttgctggctttaatacttacactcattgtc
cctccatttggagaatatcccagtttaacactgcaccctgggatctatggacaccagttt
gttttcttcagcaatgagcgccctggcagcgagcagatggtttccctcactgatgccttc
ttgaataaaccaggatttggcaatcgctgcatgaaagaacagcctcttccgaactacccc
tgcagtaatatgtcaactgcctggaacgtaccaactgtttcttctaatgtaaccaacgtg
ttttgggtccgtacatggagccctgataatcctacaccctcctgcaagtgcagcacccac
aagaaactcactatgcttcctgaatgccctccaggagctggaggctttcctcctcctcag
cgagtacagtggagcacagaaattcttcaagatctcacctacagaaacatcacagatttc
ctggtgaaaacctatcccacacttataaaagggagtttgaagagcaaatactgggtcaat
gaacaaaggtatggaggaatttctattggaggaaaactccctgttcttcatgtcactgga
gttcagattgctgattttttgagagatcttggcttaatgctcaatgtgaaagggggccac
gcttcaatggctgcttctaacgaaatgtctgatttccttaagtacatggaaacagaagac
aatgttaaggtgtggtttaacaacaaaggctggcatgccatggtcatcttcctcaacata
gccaacaatggggtcctgagagccaatctacagaaaggccaatcccctgaggaatatggg
atcactgttataaaccatcctctgaacctcaccaaggagcagctctctgaagtcaccgta
ctgaccacatcagtggatgccgctgtcgccatctgtgtgatttttgccatgtcctttatc
ccagccagttttgttctgtatctgattcaagaacgggtgacaaaagccaagcaccttcag
tttgtcagtggtgtgactgctgctgtttactggttaaccaacttcttttgggacatagtg
aactatgttgtgagtgccactatggttgtgggtatattcattggcttcaagaagaaagca
tacacttctccaagcaatctccctgtgcttatagcattgctgcttctgtatggatgggca
gtaattcccatgatgtacccagcagcctaccttttcagtgtccctagcacagcatatgtt
gcattgtcttgtattaatctcttcattgggatcaacagcagtgccattacatttgtcctg
gagctgtttgaaaataacccgtctttgctgaaattcaataacaaattgaaaaacttgctg
ctgatcttcccacatttctgcctgggaaggggactcattgacctagccatgaaccaagca
gtgactgatgtatatgccaggtttggtgaggagcgtgtctcgaatccattccagtgggac
tttattggaaagaatctgtttgctatggcagtggaagggattgtatactttgctctcaac
ctcttcatgcagcatcgttttttccacacaaggtggttttattatcctgtcacaacaccc
attaatgatgaagatgaggatgttgcagaggaaagacaaagaattttgaaaggaggaagc
aaaacagatgtcttaacattaaaagaactgacaaagctttatgcaactggacaaagacca
gcggtagacagactctgcgtgggcattcgtcctggagagtgctttggccttctgggagtg
aatggtgctggcaagacaacaactttcaaaatgctgactggggacactgatgtgacaact
ggagatgctgtggtggctggcaacagtatattgaccaacatctctgacgtccatcaaagc
atgggctattgccctcagtttgatgctattgatgacctgctcacaggtcgggaacatctc
cgtctctatgcatgcctgcgaggagtcccaggaaaggaaatcgagagggttgctgagtgg
ggtattcagaagctgggtctccacatgtatgctgaccagctggcaggcacttatagtggt
ggcaacaaacgcaaactttccactgccatcgcactgataggctgccctcctctcatccta
ctagatgaaccaactacaggaatggatcctcagtcccgacgcctcctatggaacgccatt
gtcagtgtgatcaaagaagggcgagctgtagttctgacgtcacacagcatggaagaatgt
gaagctctttgtactcgtctagccataatggtgaaggggaccttcaaatgcttgggcact
attcaacatctaaaatacaaatttggagatggctatattgtcacattgaaaatcaaagcc
ccaaagcctggagtgcctccagatcccacctcagctgaacacttcatacatgcaaacttc
cctgggagtttacagaaagagaaacactacaacatgctgcagtaccagatatgctcctcc
tcgctggccaagatctttcggttacttctcgccaataaggaaagcctgagtattgaagaa
tattctgtttctcaaacaactttagatcaagtgtttgtgaactttgctaagcaacagatg
gaagatgagacaattcctttacaccctcgtgcagctggagccaggagagaagtgaaggtg
tacccagatactcctgcacagacatctgcatag
DBGET
integrated database retrieval system
